Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq42213 174 5e-41 seq4198 165 2e-38 seq18998 136 1e-29 seq83379 134 4e-29 seq6260 132 1e-28 seq43057 120 9e-25 seq23847 116 1e-23 seq24428 84.2 7e-14 >seq42213 Length=9169 Score = 174 bits (192), Expect = 5e-41 Identities = 176/228 (77%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| || | ||| || | || |||| |||| |||| |||| Sbjct 84 GTACTCATTCCAATTACGGAGTCTCAATAGGGTCCCGTATTGTTATTATCCGTCATTACC 143 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||| | | ||||||||||| | | |||||||||||||||||| ||||||||| Sbjct 144 TCCCCGTTCTGAAAGTGGGTAATTTGAGTTCTTGCTGCCTTCCTTGGATGCGGTAGCCGT 203 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||| ||||||||||||| |||||| |||| |||||||| ||| | |||| Sbjct 204 TTCTGAGGCTGCCTCTCCGGAATCAAACCCTTATTCGCCGTTACCTGTTATGAAATTGGT 263 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || ||||||| | |||| ||| |||||| | ||||| || Sbjct 264 AGGCGCGTAATGTACCATCTACAGTTAATAAGGCAGACACTTGAAAGA 311 >seq4198 Length=21195 Score = 165 bits (182), Expect = 2e-38 Identities = 174/228 (76%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| || | |||||| || |||| |||| | || |||| Sbjct 3429 GTACTCATTCCAATTACGGAGTCTCAAAAGTATCCCGTATTGTTATTATCCGGCATTACC 3370 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | ||||| | | ||||||||||| | |||| ||||||||||||||| ||||||| | Sbjct 3369 TTCCCGTTCTGAAAGTGGGTAATTTGAGTTCCTGATGCCTTCCTTGGATGCGGTAGCCAT 3310 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||| ||||||||||||| |||||| |||| |||||||||||| || |||| Sbjct 3309 TTCTGAGGCTGCCTCTCCGGAATCAAACCCTTATTCTCCGTTACCCGTTACGACATTGGT 3250 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 || | || ||||||| | |||| ||| |||||| | ||||| || Sbjct 3249 AGACGCGTAATGTACCATCTACAGTTAATAAGGCAGACACTTGAAAGA 3202 >seq18998 Length=11765 Score = 136 bits (150), Expect = 1e-29 Identities = 103/120 (86%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 372 TTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAG 431 ||||||| ||||||||||| ||| || ||| ||||||||||||||||||||||||| | Sbjct 969 TTATCCAAGTAGTAAGGTATGATCCAAGGAACCATAACTGATTTAATGAGCCATTCGCGG 1028 Query 432 TTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 |||||| || | | || | || |||||||||||||||||||||||||||||||||||| Sbjct 1029 TTTCAC-GTTAATACGGCATGTATTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 1087 Score = 134 bits (148), Expect = 4e-29 Identities = 111/132 (84%), Gaps = 5/132 (4%) Strand=Plus/Plus Query 375 TCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434 |||| |||||||||||| ||| | ||| | ||||||||||||||||||||||| |||| Sbjct 5740 TCCAAGTAGTAAGGTACGATCCTAGGAACCAAAACTGATTTAATGAGCCATTCGCGGTTT 5799 Query 435 CACTGT-ATA-GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 | | | ||| || | | |||||||||||||||| ||||||||||||||||||||||| Sbjct 5800 CGCCTTGATACGA---CATGTACTTAGACATGCATGACTTAATCTTTGAGACAAGCATAT 5856 Query 493 GACTACTGGCAG 504 |||||| ||||| Sbjct 5857 GACTACAGGCAG 5868 >seq83379 Length=3226 Score = 134 bits (148), Expect = 4e-29 Identities = 121/151 (80%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||| |||||| ||| ||||||| ||||||| ||| ||| || ||| |||||| Sbjct 589 TTAGCTCCAGAATTGTCACAGTTATCCGAGTAGTAATTTACAATCCAAGGAACCATAACT 530 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 |||||| ||||||||| | || || | || | | || |||||||||||||||||| Sbjct 529 AATTTAAGGAGCCATTCCCTGTATCGCCTTA-ATACGGCAGGTACTTAGACATGCATGGC 471 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGG 501 || |||||| ||||||||||||||||||||| Sbjct 470 TTGATCTTTAAGACAAGCATATGACTACTGG 440 >seq6260 Length=24024 Score = 132 bits (146), Expect = 1e-28 Identities = 102/120 (85%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 372 TTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAG 431 ||||||| ||||||||||| ||| || || ||||||||||||||||||||||||| | Sbjct 10537 TTATCCAAGTAGTAAGGTATGATCCAAGCAATCATAACTGATTTAATGAGCCATTCGCGG 10596 Query 432 TTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 |||| | || | | || | ||||||||||||||||||||||||||||||||||||||| Sbjct 10597 TTTCGCCTTA-ATACGGCATGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 10655 >seq43057 Length=5333 Score = 120 bits (132), Expect = 9e-25 Identities = 135/185 (73%), Gaps = 18/185 (10%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||| || |||| | ||||||||| | |||||||||||| | Sbjct 196 TATTTTCCGTCACTACCTCCCTGTTCTGGGAGTAGGTAATTTGTGTGCCTGCTGCCTTAC 137 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct 136 TTGGA------------------GGCTCCCTCTCTGGAATCGAACCCTGATTTTCCGTTA 95 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||| || |||||||||||| | | ||||||| | |||||||| |||||| | ||| Sbjct 94 CCCATTACGACCATGGTAGGCACGAAACATACCATCAACAGTTGATAAGGCAGACACTTG 35 Query 223 AATGA 227 || || Sbjct 34 AAAGA 30 >seq23847 Length=23704 Score = 116 bits (128), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || ||||||||| || || | |||||||| || || | ||||| ||||||||| Sbjct 6086 GTCCTCATTCCAGTTGTGGGATCTCAAAAGAGTCCCAAATTATTATTTTCCGTCACTACC 6145 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||| | || | ||| ||||||| ||||||||| || ||||||| | |||||| Sbjct 6146 TCCCCATTATGGAAATGGATAATTTGAGCGCCTGCTT--TT--TTGGATGAAGAAGCCGT 6201 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||| ||||| || || |||||||| ||||||| ||||||||| ||||| || Sbjct 6202 TTCTCAGGTTCCCTTTCAAAAAACGAACCCTCATTCCCCATTACCCGTTACGACCATTGT 6261 Query 180 AG 181 || Sbjct 6262 AG 6263 Score = 104 bits (114), Expect = 7e-20 Identities = 121/161 (75%), Gaps = 12/161 (7%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 |||| |||| || |||||| ||| | |||||| | ||||||| || ||| || ||| Sbjct 22589 GCATAAATTATCTGCAGAATTGCCAAG-TTATCCGAGCAGTAAGGAACGATCCAAGGAAC 22647 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 ||||||||||||| | |||| | || ||| || | ||||||||||| Sbjct 22648 CGTAACTGATTTAATA--CTATTCAC-------CTTAATACG--GCATGTACTTAGACAT 22696 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| ||| |||||||||||| Sbjct 22697 GCATGGCTTAATCTTTGAGACAAGTATAAGACTACTGGCAG 22737 >seq24428 Length=12850 Score = 84.2 bits (92), Expect = 7e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 7848 TACTTTGACATGCATGGCTTAATCTTTGAGACTAGCATATGACTACTGGCA 7898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508107001344