Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq81161 82.4 5e-14 seq34540 71.6 8e-11 >seq81161 Length=14723 Score = 82.4 bits (90), Expect = 5e-14 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||| Sbjct 68 TCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGTAAG 11 Query 123 CT 124 || Sbjct 10 CT 9 >seq34540 Length=789 Score = 71.6 bits (78), Expect = 8e-11 Identities = 50/55 (91%), Gaps = 2/55 (4%) Strand=Plus/Minus Query 70 GTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||| ||||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct 137 GTAGTA-GCGACGGGCGGTGTGTACAAANGGCAGGGACGTAAT-CAACGTAAGCT 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300565474700