Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq22976 93.3 5e-17 seq61031 82.4 9e-14 >seq22976 Length=831 Score = 93.3 bits (102), Expect = 5e-17 Identities = 143/194 (74%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 266 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 208 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCAC 126 | ||||||||||||||||||||||| |||| ||||| | | | | || | | || Sbjct 207 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGACCCCGCGGGAC 148 Query 127 AC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCG 181 || || | ||| |||| ||| | || ||||| | |||||||| | || ||| |||| Sbjct 147 ACTCAGTTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCG 88 Query 182 CCGTGAGGCGGACC 195 || | |||||||| Sbjct 87 CCTCGCGGCGGACC 74 >seq61031 Length=19685 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/100 (80%), Gaps = 6/100 (6%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||||||||| ||| || ||||||| |||||||||||| | | |||| || | Sbjct 9236 ACCAACAAAATAGAAACG-ACTTCCTATTTCATTATTCCATGC-ACTATATTGAAGCTTT 9293 Query 71 ---AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||| |||||||||||| |||| ||||| Sbjct 9294 TAAAAGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAA 9333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594720470610