Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq22976 98.7 1e-18 seq61031 87.8 2e-15 >seq22976 Length=831 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| | || |||||| | | | Sbjct 168 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 227 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| ||||||||| | |||||||||||||| ||||| Sbjct 228 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 266 >seq61031 Length=19685 Score = 87.8 bits (96), Expect = 2e-15 Identities = 81/100 (81%), Gaps = 6/100 (6%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT----GCTCGAATACATTACCA 68 ||||||||||||||||||||| | ||||||||||| ||| ||| |||| | | || Sbjct 9333 TTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCTTTTAAAAGCTTCAATATAGT-GCA 9275 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT 108 ||||||||| ||||||| || || ||||||||||| ||| Sbjct 9274 TGGAATAATGAAATAGGAAGT-CGTTTCTATTTTGTTGGT 9236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511587501600