Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq246 113 7e-23 seq235 89.7 8e-16 >seq246 Length=1094560 Score = 113 bits (124), Expect = 7e-23 Identities = 142/196 (72%), Gaps = 28/196 (14%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| Sbjct 322621 GTACAAAGGGCAGGGATGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA---- 322567 Query 61 CTCGTTGAAGACCAACAATTGCAATGAT----CTATCCCCATCACGATGAAATTTCAAAG 116 |||||| || | | ||||| | ||||| | ||||| | Sbjct 322566 ---------------CAATTGAAAGAAAGCCCCAATCCCTAGCACGAATGAGGTTCAACG 322522 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||||| || ||||||| || |||| || ||| ||| ||||||||||||||| Sbjct 322521 GGTTACCCGGGCCGCTCGGCCAGGGA---AGACACGCTGATTACTTCAGTGTAGCGCGCG 322465 Query 176 TGCGGCCCAGAACATC 191 |||||||||||||||| Sbjct 322464 TGCGGCCCAGAACATC 322449 >seq235 Length=893873 Score = 89.7 bits (98), Expect = 8e-16 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| ||||| ||||||| ||| | |||||||||||||||| |||| ||| Sbjct 457869 GTACAAAGGGCAGGCACGTAATCAACGCAAGCATTATGACTCGCGCTTACTGGGAA-TTC 457811 Query 61 CTCGTTGAAGACCAACAATTGCAA 84 |||||| | | ||| ||||||| Sbjct 457810 CTCGTTCATGGGAAACGATTGCAA 457787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751822296995