Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1780 87.8 7e-15 seq249 77.0 1e-11 >seq1780 Length=273099 Score = 87.8 bits (96), Expect = 7e-15 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 591 TGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTG 650 |||||| ||| |||| ||| |||||| ||| |||||| || |||| ||||| |||| Sbjct 22491 TGCCTGGTCAGGACGAAGTCAGGGGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTG 22550 Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||| | ||||||||||||||| Sbjct 22551 CAAATCGATCGTCGGACCTGGGTATAGGGGCGA 22583 >seq249 Length=781839 Score = 77.0 bits (84), Expect = 1e-11 Identities = 87/117 (74%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| ||||||| ||||||||||||| || ||| || | |||||| ||| || Sbjct 120200 TGGAACCCGAACTATGGTGAACTATGTCTAGTCAGGACGAGG-----GGAAACCCTGATG 120254 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||| | |||| | ||| ||||||||||| | ||||||||||||||| Sbjct 120255 GAGGTCCGCAGTGATTCTAACATGCGAATCGATCGTCGGAACTGGGTATAGGGGCGA 120311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079476770150