Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1609 158 2e-36 seq235 125 1e-26 >seq1609 Length=151851 Score = 158 bits (174), Expect = 2e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 97180 GTCTCGTTCCTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 97239 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||||||||| |||||||||| Sbjct 97240 ACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 97279 >seq235 Length=893873 Score = 125 bits (138), Expect = 1e-26 Identities = 95/112 (85%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||| ||| || ||||||||||||||| |||||||||||||||| || ||||||| | Sbjct 457637 TAGTAGGCTAGAGTCTCGTTCGTTATCATAATTAACCAGACAAATTGTTCAACCAACTGA 457578 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| ||||||||||||||| ||||||||||| |||| |||||||||| Sbjct 457577 GAACGGATATGCACCACCACCCACCGAATCAAGAAATAGCTCTCAATCTGTC 457526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796611710433