Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq235 80.6 2e-13 seq246 77.0 2e-12 >seq235 Length=893873 Score = 80.6 bits (88), Expect = 2e-13 Identities = 72/85 (85%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||||||| || ||||| |||| || ||||||||| ||||||| ||| |||||||||| Sbjct 457918 TCCGAAAAC-CTTACTAATTCATT-CAATCGGTAGTA-GCGACGGACGGTGTGTACAAAG 457862 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 |||||| ||||||| |||||||||| Sbjct 457861 GGCAGGCACGTAAT-CAACGCAAGC 457838 >seq246 Length=1094560 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||| Sbjct 322647 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAAT-CAACGCGAGC 322590 Query 124 T 124 | Sbjct 322589 T 322589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300731211740