Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4621 80.6 3e-13 seq235 80.6 3e-13 >seq4621 Length=27846 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| || Sbjct 13553 AAACCAACAAAATAGATCCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAAGC 13611 Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||||| | ||||||||||| |||| || || || ||||| Sbjct 13612 GAAGTTGTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTGAACGTGCTGGT 13664 >seq235 Length=893873 Score = 80.6 bits (88), Expect = 3e-13 Identities = 102/134 (76%), Gaps = 10/134 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | || |||||| |||||||||||| | |||||| ||| Sbjct 457040 AAACCAACAAAATAGA-ACCAAGGTTCTATTCCATTATTCCATGCACACAGTATTCAGGC 456982 Query 69 GTA-----AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 | | |||||||||| | ||||||||||| |||| ||||| || | || || || Sbjct 456981 GAAGTTTCAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGTGCCGG-CCCACCT 456923 Query 124 C-ACAC-CAATGAA 135 | |||| ||||||| Sbjct 456922 CGACACTCAATGAA 456909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595059349962