Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4621 111 2e-22 seq235 89.7 5e-16 seq170 86.0 6e-15 >seq4621 Length=27846 Score = 111 bits (122), Expect = 2e-22 Identities = 142/191 (74%), Gaps = 10/191 (5%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAA 58 ||||| || || |||||||| ||||||||| | | ||||||||| ||| ||| ||| Sbjct 13664 ACCAGCACGTTCACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTACAACTTCGCTTGAA 13605 Query 59 TACATTAC-CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 ||| | ||||||||||| ||||||||| | ||| |||||||||| ||||| | ||| Sbjct 13604 TACTGTGTGCATGGAATAATGGAATAGGACCT-CGGATCTATTTTGTTGGTTT-TCGGAA 13547 Query 118 CGCCC--GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175 | || |||||||| |||| | | | ||||| | ||||| || | |||||| Sbjct 13546 CCCCGAGGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGA 13487 Query 176 AATTCTTGGAT 186 ||||||||||| Sbjct 13486 AATTCTTGGAT 13476 >seq235 Length=893873 Score = 89.7 bits (98), Expect = 5e-16 Identities = 104/135 (77%), Gaps = 9/135 (7%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATAC-AT 63 || ||||||||||| ||||||||| | | ||||||||| ||| || |||||| | Sbjct 456935 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTGAAACTTCGCCTGAATACTGT 456994 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 ||||||||||| |||||| || | ||||||||||||| ||||| | ||| | |||| Sbjct 456995 GTGCATGGAATAATGGAATAGAACCT-TGGTTCTATTTTGTTGGTTT-TCGGAACCCCCG 457052 Query 124 TAATGATAAATACGG 138 |||||| |||| || Sbjct 457053 -AATGATTAATATGG 457066 >seq170 Length=945555 Score = 86.0 bits (94), Expect = 6e-15 Identities = 133/185 (72%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATAC-AT 63 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 315536 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTGAAATTTCGCCTGAATACTGT 315595 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||| |||| || |||||||| | | |||||||||||| ||||| | ||| | || Sbjct 315596 GTGCATAGAATGATGGAATAGGATCT-CTGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 315653 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 315654 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 315713 Query 182 TGGAT 186 ||||| Sbjct 315714 TGGAT 315718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511879010720