Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq246 107 4e-21 seq235 89.7 1e-15 >seq246 Length=1094560 Score = 107 bits (118), Expect = 4e-21 Identities = 182/257 (71%), Gaps = 30/257 (12%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| |||| || ||||| || | ||||| |||||| ||||||||| Sbjct 322393 TTCTTAGAGGGACAGGCGGCGTCTAGCCGCACGA-GATTGAG-CAATAAGGGGTCTGTGA 322450 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 || ||||||||||||||||||||||||||| | || || | || | | Sbjct 322451 TG----------TTCTGGGCCGCACGCGCGCTACACTGAAGTAATCAGCGTG-TCTT--C 322497 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | |||||| || | |||||| | | || ||| ||||||| ||||| | | || Sbjct 322498 CCTGGCCGAGCGGCCCGGGTAACCCGTTGAACCTCATTCGTGCTAGGGATTGGG----GC 322553 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || ||||| | || |||||||||| ||||| ||| ||||||||||| Sbjct 322554 -----TTTCT-TTCAA----TTGTTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATTA 322603 Query 312 CGTCCCTGCCCTTTGTA 328 | ||||||||||||||| Sbjct 322604 CATCCCTGCCCTTTGTA 322620 >seq235 Length=893873 Score = 89.7 bits (98), Expect = 1e-15 Identities = 86/109 (79%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 || ||| ||||||| |||| | | ||||||| || | | | |||||||||| || | Sbjct 457760 AACCTCCTTCGTGCTAAGGATTGGGGCTTGCAATCGTTTCCCATGAACGAGGAATTCCCA 457819 Query 281 GTAAGCGCGTGTCATCA-GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||| ||||| | || ||||||||||||| ||||||||||||| Sbjct 457820 GTAAGCGCGAGTCATAATGCTTGCGTTGATTACGTGCCTGCCCTTTGTA 457868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946968949504