Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq617 264 4e-68 seq1196 172 2e-40 seq23230 122 3e-25 seq1486 116 1e-23 seq739 104 8e-20 seq522 96.9 1e-17 seq1765 93.3 1e-16 seq546 75.2 4e-11 >seq617 Length=521183 Score = 264 bits (292), Expect = 4e-68 Identities = 157/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 186729 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCT 186670 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 186669 TGGCAGTGGTTTCGCTAGATAGTGGGTAGGGACAGTGGGAATCTCGTTAATCCATTCATG 186610 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 186609 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 186566 >seq1196 Length=154185 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 116259 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACTTTG 116200 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||||||||||||||||||||||||||||||| ||| Sbjct 116199 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCAT 116160 Score = 158 bits (174), Expect = 4e-36 Identities = 97/102 (95%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 433 CCTTAAGA-GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 120791 CCTTAAAAAGAGTCATAGTTACTCCCGCCGTTTAGCCGCGCTTGCTTGAATTTCTTCACT 120732 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| || Sbjct 120731 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 120690 Score = 150 bits (166), Expect = 6e-34 Identities = 97/106 (92%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||| | |||||||||| |||||||||||||||||| | ||| |||||| |||||||||| Sbjct 116126 AGCACATTCCCTTGGCAGTGGTTTCGCTAGATAGTGGGTAGATACAGTGTGAATCTCGTT 116067 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 116066 GATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 116021 Score = 150 bits (166), Expect = 6e-34 Identities = 97/106 (92%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||| |||||| ||||| |||||||||||||||||| | ||| || ||| |||||||||| Sbjct 122452 AGCACGTTCCTTTGGCAGTGGTTTCGCTAGATAGTGGGTAGATACGGTGTGAATCTCGTT 122393 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122392 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 122347 Score = 136 bits (150), Expect = 1e-29 Identities = 86/92 (93%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| | Sbjct 127339 CCTTAAGAGAGTCATAGTTACTCTCGCCGTTTACCCGT--TTGCTTGAATTTCTTCACGT 127282 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATT 524 |||||||||||||||||||||||||||||||| Sbjct 127281 TGACATTCAGAGCACTGGGCAGAAATCACATT 127250 Score = 107 bits (118), Expect = 6e-21 Identities = 62/64 (97%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135859 AGTGGGTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 135800 Query 419 GAGG 422 |||| Sbjct 135799 GAGG 135796 Score = 87.8 bits (96), Expect = 6e-15 Identities = 76/97 (78%), Gaps = 17/97 (18%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||| ||||| ||||||| ||||||||| ||||||||||| Sbjct 122569 CTTAAGAGGATCATATTTACTCC-GCCGTTTAC----------------TTCTTCACTTT 122527 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 |||||||||||||||||||||||||||||||||||| Sbjct 122526 CACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 122490 >seq23230 Length=1501 Score = 122 bits (134), Expect = 3e-25 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 94 CCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAAT 35 Query 519 CACATTGCGTCAACA 533 |||||||||||| || Sbjct 34 CACATTGCGTCATCA 20 >seq1486 Length=167159 Score = 116 bits (128), Expect = 1e-23 Identities = 70/74 (95%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||| | ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 108248 AGTGGGTAGAGACAGTGGGAATCTCGTTAATCGATTCATGCGCGTCACTAATTAGATGAC 108189 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 108188 GAGGCATTTGGCTA 108175 Score = 84.2 bits (92), Expect = 7e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 513 ||||||| |||| ||||||| |||| ||| ||||| ||||||||||| || ||| ||| Sbjct 45262 TCCCGCCATTTATTCGCGCTTACTTGATTTTTTTCACGTTGACATTCAGGGCCCTGAGCA 45321 Query 514 GAAATCACATTGCG 527 |||||||||||||| Sbjct 45322 GAAATCACATTGCG 45335 >seq739 Length=260983 Score = 104 bits (114), Expect = 8e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| Sbjct 39243 AGTATGTAGGGACAGTGTGAATCTCGTTAATCCATTCATGCGCGTTACTAATTAAATGAC 39302 Query 419 GAGGCATTTGGC 430 ||||||||||| Sbjct 39303 AAGGCATTTGGC 39314 >seq522 Length=410000 Score = 96.9 bits (106), Expect = 1e-17 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||| ||||||||||||| |||||||||||||||| | || Sbjct 259542 TAGGGACAGTGGGAATCTCGTTGGTCCATTCATGCGCATCACTAATTAGATGACTAATCA 259483 Query 425 TTTGGCTA 432 |||||||| Sbjct 259482 TTTGGCTA 259475 Score = 96.9 bits (106), Expect = 1e-17 Identities = 78/93 (84%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 281 CTAGAGTCAAGCTCAACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||| ||||||||| ||||||| |||||||||| ||| ||| |||||| | ||||||| Sbjct 259802 CTATAGTCAAGCTAAACAGGGGTCTTCTTTCCTTGCTAATTTTTCCAAGCTCATTCCCTT 259743 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 ||| ||||||||||| |||||| | |||||||| Sbjct 259742 GGCAGTGGTTTCGCTGGATAGTGGGTAGGGACA 259710 Score = 84.2 bits (92), Expect = 7e-14 Identities = 66/78 (85%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA- 516 |||||||||||||||||| ||||||||||| || |||| ||| | || |||| |||||| Sbjct 251136 GCCGTTTACCCGCGCTTGCTTGAATTTCTTTACGTTGATATTTAAAGTACTGAGCAGAAA 251077 Query 517 -ATCACATTGCGTCAACA 533 ||||||| |||||| || Sbjct 251076 TATCACATCGCGTCATCA 251059 >seq1765 Length=107802 Score = 93.3 bits (102), Expect = 1e-16 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct 58998 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 58943 Score = 80.6 bits (88), Expect = 9e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||| ||||| || |||||||| |||||| |||||||||||||||||||||||||| Sbjct 58189 GGAATGTCGTTGATTCATTCATGAGCGTCAATAATTAGATGACGAGGCATTTGGCTA 58133 >seq546 Length=380206 Score = 75.2 bits (82), Expect = 4e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 196894 CGTCACTAATGAGATGAAGGGACATTTGGCTACCTTAAGAGAGTCATAGTT 196844 Score = 75.2 bits (82), Expect = 4e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 198326 CGTCACTAATGAGATGAAGGGACATTTGGCTACCTTAAGAGAGTCATAGTT 198276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634801125664