Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_033006.1 Length=11332 Score E Sequences producing significant alignments: (Bits) Value seq35464 96.9 3e-16 seq177 78.8 7e-11 >seq35464 Length=99339 Score = 96.9 bits (106), Expect = 3e-16 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 860 GAAGAAGTAGTTAAAAATGACTCATACTTTCCTTATCAAACAGACTTTAGATTAGTAAAC 919 |||||| || | || | | || |||||| | ||||| |||| | | |||||| | Sbjct 83857 GAAGAATTATTGGAACCTTATTCTTACTTTGCATATCAGTCAGATATGAAATTAGTCCAA 83916 Query 920 AAGACATATTATTCTGCATCCAAGAATCCGCAGATATACTTTCTGATACATGCAGTAGGA 979 ||||||||||| |||||||| || || || || || |||||| |||| || | | ||| Sbjct 83917 AAGACATATTACTCTGCATCAAAAAACCCACATATTTACTTTTTGATTCAATCTGAAGGT 83976 Query 980 ACTCTTCTTTCATCTACCAGATCAAAGAATGCTAAATTCTTATCAGATAGTAACATTGTG 1039 || | || | || ||||| || |||||| |||||| || ||| |||||| | Sbjct 83977 ACATTACTGCAGACAACAAGATCCAAAAATGCTCGATTCTTTTCTGATCACAACATTATT 84036 Query 1040 AATAACATTC--AATGCGCCAAGATAATGGCATATGCAT 1076 || | |||| | ||| ||||| ||||||||||||| Sbjct 84037 AACA--ATTCGTACATCGCAAAGATTATGGCATATGCAT 84073 Score = 86.0 bits (94), Expect = 5e-13 Identities = 154/220 (70%), Gaps = 10/220 (5%) Strand=Plus/Plus Query 860 GAAGAAGTAGTTAAAAATGACTCATACTTTCCTTATCAAACAGACTTTAGATTAGTAAAC 919 |||||| || | || | | || |||||| | ||||| | | | | |||||| | Sbjct 82854 GAAGAATTATTGGAACCTTATTCTTACTTTGCATATCAGATA----TGAAATTAGTCCAA 82909 Query 920 AAGACATATTATTCTGCATCCAAGAATCCGCAGATATACTTTCTGATACATGCAGTAGGA 979 ||||||||||| |||||||| || || || || || |||||| |||| || | | ||| Sbjct 82910 AAGACATATTACTCTGCATCAAAAAACCCACATATTTACTTTTTGATTCAATCTGAAGGT 82969 Query 980 ACTCTTCTTTCA-TCTACCAGATCAAAGAATGCTAAATTCTTATCAGATAGTAACATTGT 1038 || || | || | || ||||| || |||||| |||||| || ||| |||||| | Sbjct 82970 AC-ATTAGTGCAGACAACAAGATCCAAAAATGCTCGATTCTTTTCTGATCACAACATTAT 83028 Query 1039 GAATAACATTC--AATGCGCCAAGATAATGGCATATGCAT 1076 || | |||| | ||| ||||| ||||||||||||| Sbjct 83029 TAACA--ATTCGTACATCGCAAAGATTATGGCATATGCAT 83066 >seq177 Length=13561 Score = 78.8 bits (86), Expect = 7e-11 Identities = 272/412 (66%), Gaps = 18/412 (4%) Strand=Plus/Minus Query 706 TTGTACAC--TGAGGTCTCGATTTAAGGATTGCGCTAGTTTATTATCTGTAGGATATAT- 762 |||| ||| |||| || ||| ||| ||||| ||| ||| | || |||||||||| Sbjct 6828 TTGTGCACCTTGAGATCAAGATATAAAGATTGTGCTGCTTTCATGTCAATAGGATATATT 6769 Query 763 --CAGTGATCTGTTAAACCTGACCAATGAATCTGCATTCCTAGATTGGATATGGACAGAA 820 |||| |||| | || | ||||| | | |||||||||| | ||||| Sbjct 6768 GCCAGTT---TGTTGGATCTAAAGCATGAAAAGGAGCTATTAGATTGGATTTTTACAGAG 6712 Query 821 AAAATAGCTAGTGAAATGATTAGAATGTTACATCCAAATGAAGAAGTAGTTAAAAATGAC 880 ||||| || | ||| ||| ||||| | || | | ||||| | | ||| | Sbjct 6711 AAAATGGCCAATGAGGCAATTGCAATGTCAAATGAAGAACAAGAATTTGATAATCCACAT 6652 Query 881 TCATACTTTCCTTATCAAACAGACTTTAGATTAGTAAACAAGA-CATATTATTCTGCATC 939 || || ||| ||||||| | || || |||| | | |||| ||||||||||||| | Sbjct 6651 TCTTATTTTGTTTATCAAGCTGATTTAGGATTGATTCA-AAGATCATATTATTCTGCGAC 6593 Query 940 CAAGAATCCGCAGATATACTTTCTGATA-CATGCAGTAGGAACTCTTCTTTCATCTACCA 998 | ||||| | |||| ||||| || |||||||| ||||| | | | | || | Sbjct 6592 AAGAAATCCAAATTTATA-TTTCTTGTATCATGCAGTTGGAACATTATTATTAAGTAAAA 6534 Query 999 GATCAAAGAATGCTAAATTCTTATCAGATAGTAACATTGTGAATAA--CATTCAATGCGC 1056 ||||||| ||||| | || | |||||| ||| | || ||||| |||| ||| || Sbjct 6533 GATCAAAAAATGCCATTTTTATTTCAGATTTTAATTTAGTTAATAATGCATTTAAT--GC 6476 Query 1057 CAAGATAATGGCATATGCATTCTC-TACAATATTCACTATGTCTAAAGCTTT 1107 ||| ||||||| | || ||| | ||||| || || |||||||||| Sbjct 6475 AAAGGTAATGGCTTTCGCCTTCGCAAACAAT-GTCTTAATCACTAAAGCTTT 6425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36132316390400