Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq32851 127 1e-24 seq35931 116 3e-21 seq29408 105 5e-18 >seq32851 Length=24926 Score = 127 bits (140), Expect = 1e-24 Identities = 154/207 (74%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 93317 AACATCGGGTACAAGAGCATACTGTTTATTAAATGAATCGATACTAGTTCCTTTTTCTAA 93376 |||||| || | | | |||||| |||||||||| ||| ||||| || |||||||| | Sbjct 8249 AACATCCGGCAATAATGAATACTGCTTATTAAATGCATCAATACTTGTGCCTTTTTCAAG 8308 Query 93377 TAAGCATAAAAATCCAATATAATCTTCAGGGATTATATTAACATTTGTAttttttttt-- 93434 ||| || ||||||||| ||||| ||| || ||||| |||| | |||| ||||| Sbjct 8309 TAAACACAAAAATCCACAATAATTTTCTGGTATTATGTTAA---TGCTATTGTTTTTACA 8365 Query 93435 -GAATTTATTC---TAACAACAGATGTAAATAATTCTCGTCTACCCAATTGATGTGCCAT 93490 ||||| || | | || || || ||| ||||| || | |||| ||||||||||| Sbjct 8366 GGAATTAATACGTGTGACGACGGA---AAAAAATTCACGACGTCCCATTTGATGTGCCAA 8422 Query 93491 TGGTTTTCTATAGATATTTGACATTTC 93517 |||||||| ||| ||||| |||||||| Sbjct 8423 TGGTTTTCGATAAATATTCGACATTTC 8449 >seq35931 Length=21465 Score = 116 bits (128), Expect = 3e-21 Identities = 369/554 (67%), Gaps = 30/554 (5%) Strand=Plus/Plus Query 73333 AAAAGAGATCCAGTATTGTGTAAAAATTCAATAATTTTAATATCGA-GAATAG-CATTTG 73390 ||| | ||||||||| |||| |||| |||||| ||| |||| || |||| | |||||| Sbjct 12255 AAACGTGATCCAGTACTGTGCAAAAGTTCAATTGTTT--ATATTGATGAATTGGCATTTG 12312 Query 73391 CAAAAACAGATTTATTTTTTATCGGTCCCTATAATATAATTGGACAAAATGCTGATTTCG 73450 || | || ||| | ||| || || |||||| || ||||||||||| || ||||||| Sbjct 12313 CAGACACTGATCTTTTTCACATTGGACCCTATTCGATTATTGGACAAAACGCCGATTTCG 12372 Query 73451 ACGGAGATGCTGAAAATTGTTGTATATTACAAAATTTAACTAGCGGATTA--GAAGGAAG 73508 | || ||||| ||||||||||| || | |||| || ||||| | || ||| | Sbjct 12373 ATGGTGATGCGGAAAATTGTTGCATTATTGAAAA-TTCCCTAGC-AAGTACGGAACTACA 12430 Query 73509 GCTTTATTTAGCTTCTGAATATAAT---ATTTATTTAGG-TTATTTAAAATTGAANNNNN 73564 || ||||| ||| || || | || |||||||| || | ||| | || Sbjct 12431 ACTAAATTTA---TCTCCATCTACTTCAATGTATTTAGGACTAATGAAACT--AAGATGT 12485 Query 73565 TA-TTTACAGAAACACATATTTTATATATGCATCAACGAGGTTTAC---CTAAATTTCAT 73620 | ||||| |||||||| || || ||||||||||||||| |||| || || ||| Sbjct 12486 AACTTTACTGAAACACACATATTGTATATGCATCAACGACCATTACCATCTGAA--TCAC 12543 Query 73621 AAATT--TAAGAAACGTTTTGATAATATTTTATCAATATCTTTTTTAAAATGGTTTTCAA 73678 || | | |||||| | | | || ||| | || | | || ||| | ||| Sbjct 12544 AACGTCATTGTCAACGTTATCAGGAAATATTAAAATTAACAACACTTAATTGGCTCTCAT 12603 Query 73679 ATCAAGAGAATATTGATGCTGTTTTTTCTTTTAAAAAACAATATCCGA--ATGTTGAA-A 73735 | || ||||| | ||||| | | | || ||| ||| | | ||||| Sbjct 12604 GTAGTGAAAATATAACAAGTCTTTTTAATCTGATGCAAAAATGTCCAACCAATTTGAATC 12663 Query 73736 TTTTTAAATATATAGAACCTACAAGAATTGCTTT-AGAATTATTAATGTTATCAATATAT 73794 | || | | ||| ||||| ||||| | ||||| | |||| | |||||||| | |||| Sbjct 12664 TATTCGATTTTATCGAACCAACAAGTAACGCTTTGACAATT-CTGATGTTATCTACATAT 12722 Query 73795 GTTGATTATGGTTCTCAAGAAACCTTTTCATTTTTCAATGAAATTAATTTAAATATTGTA 73854 || ||||||||||| ||||| || | ||||| | ||||||||| || ||| | Sbjct 12723 GTCGATTATGGTTCAGCTGAAACTTTAAAACTTTTCGAAGAAATTAATAATAACATTCTG 12782 Query 73855 AAATTGTCTAATAA 73868 ||| | || ||||| Sbjct 12783 AAAATATCCAATAA 12796 >seq29408 Length=266871 Score = 105 bits (116), Expect = 5e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 || |||| ||||| || ||||||||||| | ||||||| | || || |||||| |||| Sbjct 78189 GACGATGCGAGAATGTGCAAAATTTGTTACAGTGAAGAATTGGGCGTAGTATTTCTACCC 78130 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 || ||||| ||||| || ||| |||||||||| || || |||| ||| | || ||| Sbjct 78129 TGCGGTCACATTGTGGCTTGTGTTAAATGTGCTCCGGGTATGACTGTGTGTGCCGTTTGT 78070 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 || |||| || | |||||| | || |||| || ||||| Sbjct 78069 CGAAAACTTGTTACTATGAATGTTCGTGCATTTTTCTCATA 78029 Score = 105 bits (116), Expect = 5e-18 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 26012 ATGAATCAAGATTAATAACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAAC 26071 |||| ||||| | |||||||||| |||||||||| | |||| | || ||||||| Sbjct 78730 ATGACGCAAGACTGCGAACATTTGAATCATGGCCAAAGTCCATGAGACAAACGAAAGAAC 78671 Query 26072 AACTTTCAAATGCGGGttttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAAT 26131 || | | |||| ||||||| ||| | ||||| || ||| | | | || ||||| | Sbjct 78670 AATTAGCGGATGCTGGTTTTTATTACACGGGAAAAGGTGATCAGACACTTTGCTATCATT 78611 Query 26132 GTGGTGGTTCTATAAATAATTTTGAATTACATGACGATCCATGGATACGACATGCAAAA- 26190 |||||||| | | || ||| || | | || ||||| ||| || |||||||||| Sbjct 78610 GTGGTGGTGGTTTGAAGGATTGGGAGGCAGAGGATGATCCTTGGGAACAACATGCAAAAT 78551 Query 26191 GAATATCCAAATTGTTTATATGTATTTCTTGTTAAAGGA-CAAGATTATATAAA 26243 | | ||||||| || |||| | ||||||| | |||| ||||||||||| || Sbjct 78550 GGTTCTCCAAAT-GTATATACCT-TTTCTTGGTCAAGGGTCAAGATTATATTAA 78499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356365767656400