Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq664424 80.6 5e-13 seq656180 80.6 5e-13 seq1467250 73.4 7e-11 >seq664424 Length=403 Score = 80.6 bits (88), Expect = 5e-13 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 209 GGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACT 267 |||||| ||||| ||||| |||||| | ||| ||| || |||||| | |||||| Sbjct 285 GGAATATTAACCTGTTTC--CCATCGATTACGCATTTCTGCCTCACCTTAGGGGCCGACT 228 Query 268 TACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCA 327 ||||| | ||||||| || |||||||||| |||| |||||||||||||| || Sbjct 227 CACCCTACCCTGATTAGCATTGGATAGGAAACCTTGATCTTCCGGCGAGGGGGTTTTTCA 168 Query 328 CCCCC 332 ||||| Sbjct 167 CCCCC 163 >seq656180 Length=401 Score = 80.6 bits (88), Expect = 5e-13 Identities = 145/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 121 ATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCG 180 ||||||| || | ||| |||| |||||||||||| ||| | | | | ||| || Sbjct 64 ATCAACGCCTCCTTACTTCAACCTACTATTCCGTCAGTAGGCAACTCTTACGCACCTTCG 123 Query 181 TCCCCACGTCACCCTCAAATGT---AGTAACGGAATACTAACCGTTTCTGCCATCGGTCT 237 | ||| || | | || | |||| |||||| ||||| ||| |||||||| | Sbjct 124 T---CACTCCATCGTGTTATATACAAGTACTGGAATATTAACCAGTTC-GCCATCGGCTT 179 Query 238 CGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGAT-CAGGA 296 | || |||| | | ||||| | ||||||| |||||| || | |||| ||| ||||| Sbjct 180 CTCCTCTCGGATTATCCTTAGGTCCCGACTAACCCTGTTCTGTCTAGCATAGATCCAGGA 239 Query 297 AACCTTAGTCTTTCGGCGAGGGGGTTTC 324 | |||||||||| |||||| |||||| Sbjct 240 ACCCTTAGTCTTACGGCGAAACGGTTTC 267 >seq1467250 Length=888 Score = 73.4 bits (80), Expect = 7e-11 Identities = 95/130 (73%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262 |||| |||||| ||||| || | |||||| ||| ||| || ||||| | | Sbjct 79 AGTACAGGAATATTAACCTGTTTT-CCATCGACTACGCTTTTCAGCCTCGCCTTAGGGAC 137 Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 ||||| |||||| |||||| || || ||||||||||| ||||||||||| ||| ||| Sbjct 138 CGACTAACCCTGCGTCGATTAACGTTGCGCAGGAAACCTTGGTCTTTCGGCGTGGGTGTT 197 Query 323 TCCCACCCCC 332 | ||| ||| Sbjct 198 TTTCACACCC 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944029862400