Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1182049 331 2e-88 seq516433 288 2e-75 seq15302 248 2e-63 seq217177 201 2e-49 seq498275 86.0 1e-14 seq737270 78.8 2e-12 >seq1182049 Length=572 Score = 331 bits (366), Expect = 2e-88 Identities = 279/335 (83%), Gaps = 7/335 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| |||||||||| ||| |||||||||||||||||||||| | Sbjct 227 CCCGACGAGGGGAGTGAAA-AGACCCTGAAACCGTGCGCCTACAAGCGGTCGGAGCCACG 285 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | | | ||||||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct 286 TAAGT-GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACACCTCACTAGCGAG 344 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 |||||| ||| ||| ||| || ||||| ||||||||| || || |||||| | || | Sbjct 345 TTTAAGGTCTTGAGGACCGG-AGGCGAAGGGAAAGCGAGTCTGAATAGGGCG-CAAGCTA 402 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTA--AC 241 |||| | |||||||||||||| |||||||||||| | ||||||||||| | | || | Sbjct 403 GTGGGGGTAGACGCGAAACCTGGTGATCTACCCATGGGCAGGTTGAAGCCCGGATAGTAT 462 Query 242 GCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGG 301 || | |||||||||||||||||| | |||||||| | |||||||||| | |||||||| Sbjct 463 CCGCG-TGGAGGACCGAACCGGTACATGTTGAAAAATGTTCGGATGACCTGTGGGTAGGG 521 Query 302 GTGAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||||||||||| ||| ||| ||||||| Sbjct 522 GTGAAAGGCCAATCAAACCAGGAGATATCTCGTAC 556 >seq516433 Length=376 Score = 288 bits (318), Expect = 2e-75 Identities = 259/322 (80%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 17 GTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGACG 76 |||||| ||| |||||| ||| |||||||||||||||| ||| | | | | |||||| Sbjct 2 GTGAAAGAGAACCTGAAACCGTACGCCTACAAGCGGTCGAAGCACATTTACTGTGTGACG 61 Query 77 GCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCA 136 |||||||||||||||||||||||||||||||| | || | ||| ||||||| | || | Sbjct 62 GCGTGCCTTTTGCATAATGAGCCTACGAGTTACT-GTTGCTAGCAAGGTTAAAGATTTAA 120 Query 137 GGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA--GTTGGTGGCGCTAGA 194 || | | |||||||| ||||||||| || || |||||| | ||| || | |||| Sbjct 121 GGTCTGG-AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGGTTATAGTTAGTAGTAGTAGA 179 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 ||||||||| |||||||||||| | ||||||||||| | |||||| | ||||||| Sbjct 180 CGCGAAACCGAGTGATCTACCCATGGGCAGGTTGAAGCTGTGGTAACACACAGTGGAGGA 239 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAAT 314 ||||||| || |||||||||||| || ||||||| | ||||||||||||||| ||||| Sbjct 240 CCGAACCAGTTGACGTTGAAAAGTCTTTGGATGACCTGTGGGTAGGGGTGAAAGCCCAAT 299 Query 315 CAAACTGGGAAATAGCTCGTAC 336 |||||| ||||||||||||||| Sbjct 300 CAAACTCGGAAATAGCTCGTAC 321 >seq15302 Length=302 Score = 248 bits (274), Expect = 2e-63 Identities = 218/268 (81%), Gaps = 3/268 (1%) Strand=Plus/Plus Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 1 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTATGTAGCGAGTTTAAG 60 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 ||||||| || ||| |||| ||||||||| || || ||||||| ||| | ||| Sbjct 61 TACTTCAGGTACGGAAGC-GAAGCGAAAGCGAGTCTGAATAGGGCGA-GAGCTACATGCG 118 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA-CGCGTGAT 248 |||||||||||| |||||||| ||| | ||||| |||||| ||||| | || || Sbjct 119 TTAGACGCGAAACTGAGTGATCTATCCATGGGCAGGCTGAAGTTCCGGTAGTCCCGGAAT 178 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||| ||||||| || |||||||||||| || ||||||| | || |||||||||||| Sbjct 179 GGAGGGCCGAACCCGTTGACGTTGAAAAGTCTTGGGATGACCTGTGGATAGGGGTGAAAG 238 Query 309 GCCAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||||| || ||||||||||| Sbjct 239 GCCAATCAAACTCAGAGATAGCTCGTAC 266 >seq217177 Length=330 Score = 201 bits (222), Expect = 2e-49 Identities = 162/193 (84%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 || || || ||||||||| |||||||||||| | || | ||| | ||||||||||||| Sbjct 288 AGGCGGAGCGAAAGCGAGTCTTAACAGGGCG-CAAGCTATTGGAGGTAGACGCGAAACCA 230 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA-CGCGTGATGGAGGACCGAACCGG 263 ||||||||||||| | ||||| |||||| || || | || |||||||| |||||||| Sbjct 229 TGTGATCTACCCATGTGCAGGGTGAAGTTCCGATAGTCTCGGGATGGAGGCCCGAACCGA 170 Query 264 TAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGG 323 |||||||||||||||||||||||||| | |||||||||||||||||||||||||| || Sbjct 169 TAAACGTTGAAAAGTTTTCGGATGACGTGTGGGTAGGGGTGAAAGGCCAATCAAACATGG 110 Query 324 AAATAGCTCGTAC 336 | ||| ||||||| Sbjct 109 AGATATCTCGTAC 97 >seq498275 Length=373 Score = 86.0 bits (94), Expect = 1e-14 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||||||||||| |||||||||||||| ||||||| | || |||| |||||| Sbjct 29 TGGAGGACCGAACCCACTAACGTTGAAAAGTTAGGGGATGACCTGTGGCTAGGAGTGAAA 88 Query 308 GGCCAATCAAACTGGGAAATAGCTCGT 334 ||| |||||||| |||| |||||| || Sbjct 89 GGCTAATCAAACCGGGAGATAGCTGGT 115 >seq737270 Length=418 Score = 78.8 bits (86), Expect = 2e-12 Identities = 85/113 (75%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 222 CAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTT 281 |||||||||| || ||||| | |||||||||||||| || |||||||| || Sbjct 409 CAGGTTGAAGATGCCGTAACAGGCATTGGAGGACCGAACCCACGAATGTTGAAAAATTCG 350 Query 282 CGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||| | | || | || ||||||||| |||||| || ||| |||||| || Sbjct 349 GGGATGAGTTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGT 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 956616927232