Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1663180 192 9e-47 seq1189799 187 4e-45 seq1630659 185 1e-44 seq1595707 100 4e-19 seq755053 77.0 5e-12 seq388233 77.0 5e-12 >seq1663180 Length=5304 Score = 192 bits (212), Expect = 9e-47 Identities = 177/218 (81%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 4095 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 4038 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| | | |||||||||||| | ||||| ||| || | ||||| | || Sbjct 4037 CTCGTTCATGGGAAACAATTGCAATCCCCAATCCCTATCGGGAAGGGGTTTCATTCGGTT 3978 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| | || ||||| | || || | ||| ||||||||||||||| Sbjct 3977 ACCCACTCCTTTCGG--AGGGGGATAG-CGCGCTGGTCCCTTCATTGTAGCGCGCGTGCG 3921 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||| Sbjct 3920 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 3883 >seq1189799 Length=577 Score = 187 bits (206), Expect = 4e-45 Identities = 182/229 (79%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| |||| ||||||| ||||||||| |||||| | Sbjct 69 GTACAAAGGGCAGGGACTTAATCAACGCAAGCT-GATGACTTGCGCTTACTGGGAATT-C 126 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA----TTTCAAAG 116 |||||| | | ||||||||||| | ||||| |||| ||||| || || | Sbjct 127 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCAATCA---TGAAAGGTTTTGCAGCG 183 Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||| |||| ||| |||| |||||| ||| || | | |||||||||||||||| Sbjct 184 ATTTCCCGCTCCTCTCGGAGAAGGTG---GACCCGCTAACCCTTTCAGTGTAGCGCGCGT 240 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 241 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 288 >seq1630659 Length=1821 Score = 185 bits (204), Expect = 1e-44 Identities = 175/217 (81%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||| ||| Sbjct 143 ACAAAGGGCAGGGACGTAATCAACACGAGCT-GATGACTCGCGCTTACTGGGAATT-CCT 200 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTAC 121 |||| ||| | | |||| ||| ||||||| | ||||| | | ||||| | |||| Sbjct 201 CGTTCAAGGCGGATAATTACAAACGCCTATCCCAAGCACGAAGGAGGTTCAACGGGTTAC 260 Query 122 CCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||||||| || || | || || || ||| | | ||| |||||||||||||||| Sbjct 261 CCAGTCCTGTCGGACAGGG--AAAGCACACGCTGATTCCTTCATTGTAGCGCGCGTGCGG 318 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| | ||||||||||||||||||||||| |||||| Sbjct 319 CCCTGGACATCTAAGGGCATCACAGACCTACTATTGC 355 >seq1595707 Length=1411 Score = 100 bits (110), Expect = 4e-19 Identities = 136/185 (74%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 ||||||||| |||||||| |||||||| || || | | ||||| |||||| | ||| Sbjct 319 TGATGACTCACGCTTACTGGGAATTTC-TCATTCATGGGAAACAACTGCAATCCCCAATC 377 Query 94 CCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGT 152 || ||| || | | ||||| | |||||| ||| | | |||| ||||| | | Sbjct 378 CCTATCCAGAAGGAGTTTCATTCAGTTACCCACTCCTTTAG---AAGGGGATAGCGT-GC 433 Query 153 TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 212 || | ||| |||||| | |||| ||||||||||||||||||||||||||| |||| Sbjct 434 TGGTCCCTTCATTGTAGCCTGTGTGCAGCCCAGAACATCTAAGGGCATCACAGATATGTT 493 Query 213 ATTGC 217 ||||| Sbjct 494 ATTGC 498 >seq755053 Length=422 Score = 77.0 bits (84), Expect = 5e-12 Identities = 47/49 (96%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTA 49 |||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 48 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTA 1 >seq388233 Length=356 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG-GCATCACAGA 206 ||||||| | |||||||||| |||||||| ||||||||||| ||||| |||||||||| Sbjct 83 CTCGTTGGCTGAATCAGTGTAGTGCGCGTGCAGCCCAGAACATTTAAGGAGCATCACAGA 142 Query 207 CCTG 210 |||| Sbjct 143 CCTG 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739880994540