Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1630659 214 3e-53 seq1189799 212 1e-52 seq1663180 161 2e-37 seq1187892 105 1e-20 seq1630924 86.0 1e-14 seq1517845 86.0 1e-14 seq396457 82.4 1e-13 seq43013 78.8 1e-12 seq388233 77.0 5e-12 seq1595707 73.4 6e-11 >seq1630659 Length=1821 Score = 214 bits (236), Expect = 3e-53 Identities = 201/250 (80%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||| ||||||||||||||||||| | ||||||||||||||||||||||| ||||| Sbjct 295 TCCTTCATTGTAGCGCGCGTGCGGCCCTGGACATCTAAGGGCATCACAGACCTACTATTG 354 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--CA 129 | || || | |||| | ||| |||||||||||||| ||| || || || Sbjct 355 C-TCTGTCT-CGTGCGGCTAAACGCCGCGTGTCCCTCTAAGAAG--AGCGTCCGACAGCA 410 Query 130 TAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | ||| | |||||||| ||| || |||||| ||||||||||||||||||||||| Sbjct 411 AGGATCGGAACGTCTATTTAGTAGGCTAGAGTCTCGATCGTTATCGGAATTAACCAGACA 470 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||| Sbjct 471 AATCGCTCCACCAACTAAGAATGGCCATGCACCACCTTCCACAGAATCAAGAAAGAGCTC 530 Query 249 TCAATCTGTC 258 | |||||||| Sbjct 531 TTAATCTGTC 540 >seq1189799 Length=577 Score = 212 bits (234), Expect = 1e-52 Identities = 207/265 (78%), Gaps = 29/265 (11%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 225 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 283 Query 76 AAACTTCCATTGGCTGGAA--GCCAATAGTCCCTCTAAGAAGCCAG------------CC 121 || || || |||| | || | ||||||||||||| || || Sbjct 284 AATCT-CCTGCAGCTGCACTTGCTGCTCATCCCTCTAAGAAGATAGATTCGAACGTGGCC 342 Query 122 A------CCAACCATA--GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 | | ||||| ||||| |||||||| ||| | ||||||||||||| | Sbjct 343 ATGCGAACGAACCACCACGTCGA-----CTATTTAGTAGGCCAGAGTCTCGTTCGTTACC 397 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 398 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACCAA 457 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 ||| |||||||||| | |||||||| Sbjct 458 ATCGAGAAAGAGCTCTTAATCTGTC 482 >seq1663180 Length=5304 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct 3591 CTAGTTAGCAGGTTAGAGTCTCGTTCGTTATCGGAATAAACCAGACAGATCACTCCACCA 3532 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||| Sbjct 3531 ACTAAGAACGGCCATGCACCACCATCCACCGAATCGAGAAAGAGCCCTCAATCTGTC 3475 Score = 104 bits (114), Expect = 4e-20 Identities = 91/111 (82%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 5 CGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64 || ||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3950 CGCTGGTCCCTTCATTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 3891 Query 65 GTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||| ||| | || |||| || ||| | ||||||||||||| Sbjct 3890 GTTATTG-CTCTTTC-TCGTGCGGCTAGACGCCGCTTATCCCTCTAAGAAG 3842 >seq1187892 Length=575 Score = 105 bits (116), Expect = 1e-20 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 CTCGTTCGTTATCGGAATAAACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCAC 60 Query 221 CAC 223 ||| Sbjct 61 CAC 63 >seq1630924 Length=1826 Score = 86.0 bits (94), Expect = 1e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 ||||||||||| ||||| ||||||||| |||| ||||| || | || || ||||||| Sbjct 1756 TTAGCAGGTTAGAGTCTCATTCGTTATCAGAATAAACCATCCAGACCATCCCCCCAACTA 1697 Query 206 AGAACGGCCATGCACCA 222 ||||||||||||||||| Sbjct 1696 AGAACGGCCATGCACCA 1680 >seq1517845 Length=1028 Score = 86.0 bits (94), Expect = 1e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 ||||||||||| ||||| ||||||||| |||| ||||| || | || || ||||||| Sbjct 799 TTAGCAGGTTAGAGTCTCATTCGTTATCAGAATAAACCATCCAGACCATCCCCCCAACTA 858 Query 206 AGAACGGCCATGCACCA 222 ||||||||||||||||| Sbjct 859 AGAACGGCCATGCACCA 875 >seq396457 Length=357 Score = 82.4 bits (90), Expect = 1e-13 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||| Sbjct 295 CCAACTAAGAACGGCCATGCACCACCATCCACCGAATCGAGAAAGAGCCCTCAATCTGTC 354 >seq43013 Length=306 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||||||||||||||||||||||||| ||| |||| |||||||| Sbjct 306 ATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCACCGAATAGAGAAAGAG 251 >seq388233 Length=356 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG-GCATCACAGA 61 |||| ||||| ||||||||| |||||||| ||||||||||| ||||| |||||||||| Sbjct 83 CTCGTTGGCTGAATCAGTGTAGTGCGCGTGCAGCCCAGAACATTTAAGGAGCATCACAGA 142 Query 62 CCTG 65 |||| Sbjct 143 CCTG 146 >seq1595707 Length=1411 Score = 73.4 bits (80), Expect = 6e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||| | |||| ||||||||||||||||||||||||||| ||||||||| Sbjct 439 CCTTCATTGTAGCCTGTGTGCAGCCCAGAACATCTAAGGGCATCACAGATATGTTATTGC 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783959011236