Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1557224 199 8e-49 seq905361 192 1e-46 seq1049466 129 1e-27 seq967181 123 5e-26 seq908585 123 5e-26 seq765867 116 7e-24 seq943070 75.2 2e-11 >seq1557224 Length=1184 Score = 199 bits (220), Expect = 8e-49 Identities = 235/313 (75%), Gaps = 10/313 (3%) Strand=Plus/Minus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGT-TGTATTGGATTTCTAAC 88 |||||||| | | |||| | | ||| ||||| |||| || ||| ||| | ||||||| Sbjct 1014 ACGCCAGTTTGCGTGGAGTCACCTTTGAGATACCACCCTTGCATGT-TTGAAGTTCTAAC 956 Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148 | | |||| ||||| |||||| ||| | ||| |||||||||||||||||| Sbjct 955 CC----AGGTATTACCGTATCGGGGACAATGTATGGTGGGTAGTTTGACTGGGGCGGTCT 900 Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208 ||||| ||||||||||||||| || | ||| |||||||||| || ||| | | |||| Sbjct 899 CCTCCGAAAGAGTAACGGAGGAGCGCGAAGGTACCCTCAGCGCGGTCGGACATC--GCGC 842 Query 209 AC--AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAA 266 | ||||||| ||| ||||||| || ||||||| || |||||| |||||| ||||| Sbjct 841 AATGAGTGCAAGAGCATAAGGGTGCTTAACTGCGAGACTGACAAGTCGAGCAGGTACGAA 782 Query 267 AGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGC 326 ||| || || |||||||| || ||| | || | |||| |||||| ||||||||||| Sbjct 781 AGTAGGTTCTAGTGATCCGGTGGCGCTATACGGTAGGGCCATCGCTCAACGGATAAAAGG 722 Query 327 TACCCTGGGGATA 339 ||| | ||||||| Sbjct 721 TACGCCGGGGATA 709 >seq905361 Length=459 Score = 192 bits (212), Expect = 1e-46 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131 GTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCT 190 |||||||||||| |||||||||| |||||||||||||||| | |||| | |||||||| Sbjct 459 GTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTCTAAAGGTTCCCTCAGCA 400 Query 191 TGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAA 250 | ||| |||| |||| | ||||||| |||| ||||| | ||||||| || ||| ||| Sbjct 399 CGCTTGGTAACCGTGCGTAGAGTGCAATGGCATAAGGGAGCTTGACTGAGAGACCTACAA 340 Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 ||| | |||| |||||||| | || || |||||||| ||| | | |||||| |||| ||| Sbjct 339 GTCGATCAGGTACGAAAGTAGAGCATAGTGATCCGGTGGTTCCGTATGGAAGGGCCATCG 280 Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| | ||||||||| ||| | ||||||| Sbjct 279 CTCAAAGGATAAAAGGTACTCCGGGGATA 251 >seq1049466 Length=509 Score = 129 bits (142), Expect = 1e-27 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||||||| | | ||| |||||||||||||||||| ||||||||||||||||||||| | Sbjct 311 GGACAGTGCCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCCAAAGAGTAACGGAGGAG 370 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | | ||| | || || || ||| | | | | |||| || || | ||| | Sbjct 371 CACGAAGGTTGGCTAAGTACGGTCGGACATCGTATGGTTAGTGTAATGGTAGAAGCCAGC 430 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 || ||||||| || || ||| |||||| |||||||| || | || |||||||| ||| Sbjct 431 TTAACTGCGAGACAGACACGTCGAGCAGGTACGAAAGTAGGTCATAGTGATCCGGTGGTT 490 Query 292 CTGAATGGAACGGCCGTCG 310 |||||||||| |||| ||| Sbjct 491 CTGAATGGAAGGGCCATCG 509 >seq967181 Length=479 Score = 123 bits (136), Expect = 5e-26 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 167 GGACAGTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 108 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||| | | ||||| || ||||| | || | ||| ||||||||||| | | Sbjct 107 TACGAAGGTGCGCTCAGACCGGTCGGAAATCGGTCGTAGAGTATAAAGGCAAAAGCGCGC 48 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTA 277 |||||||||| || || ||| |||||| |||||||| || |||| Sbjct 47 TTGACTGCGAGACAGACACGTCGAGCAGGTACGAAAGTAGGTCTTA 2 >seq908585 Length=460 Score = 123 bits (136), Expect = 5e-26 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||||||| | ||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct 301 GGACAGTGCGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCT 360 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | |||| | |||||| || ||| || | || ||| ||||||| |||| ||||| | Sbjct 361 TCTAAAGGTGCCCTCAATACGGTTGGCAATCGTGTGCAGAGTGCAATGGCACAAGGGCGC 420 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGT 269 ||||||| || || || ||| | |||| |||||||| Sbjct 421 TTGACTGAGAGACATACAGGTCGACCAGGTACGAAAGT 458 >seq765867 Length=424 Score = 116 bits (128), Expect = 7e-24 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||| | ||| |||||||||||||||||||||||| |||| ||| ||||||| Sbjct 127 GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCGAAAGCGTATCGGAGGCT 68 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | |||||||||||||| || ||| |||| | || | ||| || |||| ||||||| Sbjct 67 TCTAAAGATACCCTCAGTACGGTTGGTAACCGTACGTAGAGTATAATGGCATAAGGGTGC 8 Query 232 TTGACTG 238 ||||||| Sbjct 7 TTGACTG 1 >seq943070 Length=471 Score = 75.2 bits (82), Expect = 2e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 276 TAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGG 335 || |||||||| ||| |||||||||| |||| |||||| ||||||||||| ||| | ||| Sbjct 466 TAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGG 407 Query 336 GATA 339 |||| Sbjct 406 GATA 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 966057225856