Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq765867 197 1e-48 seq908585 194 2e-47 seq1049466 147 2e-33 seq807098 145 8e-33 seq967181 138 1e-30 seq1126153 105 7e-21 >seq765867 Length=424 Score = 197 bits (218), Expect = 1e-48 Identities = 132/151 (87%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| | Sbjct 272 CGGGGTCTTTTCGTCCCATTGCGGGTAACCGGCATCTTCACCGATACTTCAATTTCACCG 331 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct 332 AGCTCATGGCCGAGACAGTGCCCAAATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 391 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 392 GACAAGGAATTTCGCTACCTTAGGACCGTTA 422 >seq908585 Length=460 Score = 194 bits (214), Expect = 2e-47 Identities = 131/151 (87%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | Sbjct 155 CGGGGTCTTTTCGTCCCACTGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCG 96 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || ||||||| | |||||||||||||||||||||||||||| Sbjct 95 AGCTCATGGCCGAGACAGTGTCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCC 36 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 35 GACAAGGAATTTCGCTACCTTAGGACCGTTA 5 >seq1049466 Length=509 Score = 147 bits (162), Expect = 2e-33 Identities = 123/152 (81%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | ||||||||||| Sbjct 155 CGGGGTCTTTCCGTCTAGCCGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTG 96 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||||||||||||||||||||||||||||| Sbjct 95 AG-TCTCGGGTGGAGACAGCGTGGCCATGATTACACCATTCGTGCAGGTCGGAACTTACC 37 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 36 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 5 >seq807098 Length=434 Score = 145 bits (160), Expect = 8e-33 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | ||||||||||| Sbjct 12 CGGGGTCTTTCCGTCTAGCCGCGGGTACGCTGCATCTTCACAGCGATTTCAATTTCACTG 71 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||| ||||||||||||||||||||||||| Sbjct 72 AG-TCTCGGGTGGAGACAGTGTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACC 130 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 131 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 190 Query 202 C 202 | Sbjct 191 C 191 >seq967181 Length=479 Score = 138 bits (152), Expect = 1e-30 Identities = 121/152 (80%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||||| || | |||||||||| | | | ||||||||||| Sbjct 323 CGGGGTCTTTCCGTCTAGCCGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTG 382 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||| ||||||||||||||||||||||||| Sbjct 383 AG-TCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 441 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 442 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 473 >seq1126153 Length=543 Score = 105 bits (116), Expect = 7e-21 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 71 Query 173 A 173 | Sbjct 72 A 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538381489644