Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq334411 524 2e-146 seq266828 394 2e-107 seq532890 378 2e-102 seq1551677 363 3e-98 seq417700 212 1e-52 seq928230 156 9e-36 seq933635 123 5e-26 seq4398 89.7 1e-15 seq36691 77.0 7e-12 >seq334411 Length=348 Score = 524 bits (580), Expect = 2e-146 Identities = 293/295 (99%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 73 TCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 TCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCA 61 Query 133 TCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAA 192 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 62 TCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAA 121 Query 193 TCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGA 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 TCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGA 181 Query 253 CGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAG 312 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 182 CGTATGCGGTATTAGCGTCCGTTTCCGGACGTTATCCCCCACTACCAGGCAGATTCCTAG 241 Query 313 GCATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCTTCTCTCTACCGCTCG 367 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 242 GCATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCTTCTCTCTACCGCTCG 296 >seq266828 Length=337 Score = 394 bits (436), Expect = 2e-107 Identities = 291/337 (86%), Gaps = 2/337 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||| ||| |||||| ||||||| |||||||||||||| ||||| |||||||||||||| Sbjct 337 CTTTTCAACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGCGTCAGGCTTTCGCCC 280 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 279 ATTGCGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 220 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 219 TGTGGCTGATCATCCTCTCAGACCAGCTATAGATCGTCGCCTTGGTGAGCCATTACCTCA 160 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| || |||||||| |||| | |||| |||||| |||||| ||| Sbjct 159 CCAACAAGCTAATCTAACGCGGGCTCATCCAATAGTGGAAGGTCCGAAGATCCCCTCCTT 100 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||||||| |||||||||||||||| |||||| |||||||||| |||| | Sbjct 99 TCCCCCGTAGGGCGTATGCGGTATTAGCTCGAGTTTCCCCGAGTTATCCCCCGCTACTGG 40 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTCT 337 | ||||||| | || ||||||||||||||||| |||| Sbjct 39 GTAGATTCCCACGCGTTACTCACCCGTCCGCCACTCT 3 >seq532890 Length=379 Score = 378 bits (418), Expect = 2e-102 Identities = 267/303 (88%), Gaps = 2/303 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct 76 CTTTACAACCCGAAGGCCTTCTT-CATACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 133 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 193 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 194 TGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTCA 253 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||| Sbjct 254 CCAACTAGCTAATCCCACCTAGGCATATCTTGACGCGAGAGGCCCGAAGGTCCCCCTCTT 313 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | |||||||| |||||||||||||| ||||||| | |||||||||||| | || Sbjct 314 TGGCCCGTAGGCATTATGCGGTATTAGCCATCGTTTCCAATGGTTATCCCCCACATCAAG 373 Query 301 GCA 303 ||| Sbjct 374 GCA 376 >seq1551677 Length=1159 Score = 363 bits (402), Expect = 3e-98 Identities = 283/335 (84%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || | | ||||||| ||||||||||| |||| ||||||||||||| ||||| Sbjct 970 CTTTACAACCCTAGGGCCTTCTT-CACACACGCGGTATTG-CTGGATCAGGCTTGCGCCC 913 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||| || |||||||||||| || Sbjct 912 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTTCGGGCCGTGTCTCAGTCCCGA 853 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| ||| ||||||||| |||| || ||||| | Sbjct 852 TGTGGCTGATCATCCTCTCAAACCAGCTACCAATCGTCGCCATGGTAGGCTCTTACCCTA 793 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||| ||||||||| || ||||||||||| | ||| |||| |||||| |||||| ||| Sbjct 792 CCATCTAGCTAATTGGATATAGGCTCATCTTTTTGCGTAAGGTCCGAAGATCCCCTACTT 733 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||| ||| |||||||||||||||||| ||||||| ||||| |||||||| | || Sbjct 732 TCCCCCGAAGGGCGTATGCGGTATTAGCGTACGTTTCCATACGTTGTCCCCCACAAAAAG 673 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| ||||||||||||||||||| || Sbjct 672 GTAGATTCCTATACATTACTCACCCGTCCGCCACT 638 >seq417700 Length=360 Score = 212 bits (234), Expect = 1e-52 Identities = 165/194 (85%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| | || ||| ||||| | |||||||||||||| |||| |||||||||| ||||| Sbjct 223 CTTTACGACCCTAAGGCCTTCAT-CACACACGCGGCAT-GGCTAGATCAGGCTTGCGCCC 166 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||| || ||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct 165 ATTGTCTAAGATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 106 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||||||||| || | ||||| || |||||| | |||||| ||||||||| | Sbjct 105 TGTGGCTGATCATCCCCTAAAACCAGCTATAGATCGTAGGCTTGGTAGGCCATTACCCCC 46 Query 181 CCAACTAGCTAATC 194 |||||| |||||| Sbjct 45 CCAACTCCCTAATC 32 >seq928230 Length=466 Score = 156 bits (172), Expect = 9e-36 Identities = 103/113 (91%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 351 CACGCGGCAT-GGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCACTGCTGCCTC 409 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAG 141 |||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct 410 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAG 462 >seq933635 Length=468 Score = 123 bits (136), Expect = 5e-26 Identities = 75/77 (97%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 394 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 451 Query 61 ATTGTCCAATATTCCCC 77 ||||||||||||||||| Sbjct 452 ATTGTCCAATATTCCCC 468 >seq4398 Length=301 Score = 89.7 bits (98), Expect = 1e-15 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 255 TATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGC 314 |||||||||||||| ||||||| | |||||||||||| | |||| |||| |||| Sbjct 3 TATGCGGTATTAGCCATCGTTTCCAATGGTTATCCCCCACATCAGGGCAATTTCCCAGGC 62 Query 315 ATTACTCACCCGTCCGCCGCTC 336 |||||||||||||||||||||| Sbjct 63 ATTACTCACCCGTCCGCCGCTC 84 >seq36691 Length=305 Score = 77.0 bits (84), Expect = 7e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 272 CGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGC 331 ||||||| | ||| || |||||||| ||||||||||||| || ||||||||||| |||| Sbjct 303 CGTTTCCACATGTTGTCTCCCACTACTAGGCAGATTCCTACGCGTTACTCACCCGGCCGC 244 Query 332 CGCTC 336 ||||| Sbjct 243 CGCTC 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1054166679680