Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq266828 201 2e-49 seq1551677 194 3e-47 seq532890 194 3e-47 seq334411 159 7e-37 seq417700 154 3e-35 seq928230 116 7e-24 >seq266828 Length=337 Score = 201 bits (222), Expect = 2e-49 Identities = 234/312 (75%), Gaps = 19/312 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||| ||||| |||| ||||||| ||||||| ||||||||||||||||||||| Sbjct 305 GGCATGGCTGCGTCAGGCTTTCGCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAG 246 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 245 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATAGAT 186 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||| | |||||| |||| || |||| Sbjct 185 CGTCGCCTTGGTGAGCCATTACCTCACCAACAAGCTAATCTAACGCGGGCTCATC----- 131 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCT--------GACATTATGCGGTAT 232 | || | | |||| ||| ||| || |||| | | |||||||||| Sbjct 130 -CAAT-AGTGGAAGGTC--CGAA-GATCCCCTCCTTTCCCCCGTAGGGCGTATGCGGTAT 76 Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292 |||| |||||| ||||| || | || || || || | |||| ||||||||| Sbjct 75 TAGCTCGAGTTTCCCCGAGTTATCCCCCGCTACTGGGTAGATT-CCCACGCGTTACTCAC 17 Query 293 CCGTCCGCCACT 304 |||||||||||| Sbjct 16 CCGTCCGCCACT 5 >seq1551677 Length=1159 Score = 194 bits (214), Expect = 3e-47 Identities = 230/308 (75%), Gaps = 19/308 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| |||||| ||||||||||||||||||||||||| Sbjct 932 GCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTTC 873 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||| ||||||| | ||| ||||||| || |||||| ||||||| Sbjct 872 GGGCCGTGTCTCAGTCCCGATGTGGCTGATCATCCTCTCAAACCAGCTACCAATCGTCGC 813 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 | |||| |||| ||| | |||| ||| ||||| || || ||||||| ||| || Sbjct 812 CATGGTAGGCTCTTACCCTACCATCTAGCTAATTGGATATAGGCTCATCTTTTTGCG-TA 754 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCT--------GACATTATGCGGTATTAGCGT 238 | |||| ||| ||| || | || | | |||||||||||||||| Sbjct 753 A------GGTC--CGAA-GATCCCCTACTTTCCCCCGAAGGGCGTATGCGGTATTAGCGT 703 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||||| ||||| | || | | ||||| || || || | |||||||||||||| Sbjct 702 ACGTTTCCATACGTTGTCCCCCACAAAAAGGTAGATTCCT-ATACATTACTCACCCGTCC 644 Query 299 GCCACTAA 306 |||||||| Sbjct 643 GCCACTAA 636 >seq532890 Length=379 Score = 194 bits (214), Expect = 3e-47 Identities = 139/160 (87%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 108 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 167 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| ||| Sbjct 168 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGAT 227 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| ||||||| || |||| ||||||||||| |||||| Sbjct 228 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 267 >seq334411 Length=348 Score = 159 bits (176), Expect = 7e-37 Identities = 199/267 (75%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 40 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAA 99 ||||||||||||||||||||||||||||| |||||||||||| ||| |||| | | ||| Sbjct 3 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 62 Query 100 CCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||||| || | ||| |||||||| ||||||| || |||| | ||||||||| ||||| Sbjct 63 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAAT 122 Query 160 CGGCCGCGAGCCCATCTTTCAGCG-ATAAATCTTTGGTCAAAGAATGATGCCATCC-TCT 217 | | | || ||||| |||| | | |||| || | | || | Sbjct 123 CCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTC---CCCTGCTTTCTCCCGTAG 179 Query 218 GACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGC 277 ||| |||||||||||||||| ||||||| ||||||| || | || |||||| || | Sbjct 180 GAC-GTATGCGGTATTAGCGTCCGTTTCCGGACGTTATCCCCCACTACCAGGCAGATTCC 238 Query 278 TCACGTGTTACTCACCCGTCCGCCACT 304 | | | ||||||||||||||||| || Sbjct 239 T-AGGCATTACTCACCCGTCCGCCGCT 264 >seq417700 Length=360 Score = 154 bits (170), Expect = 3e-35 Identities = 130/160 (81%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| || | |||||||| || || || |||||||||||||||||| Sbjct 191 GGCATGGCTAGATCAGGCTTGCGCCCATTGTCTAAGATTCCTCACTGCTGCCTCCCGTAG 132 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| || || | || |||| ||| Sbjct 131 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCCCTAAAACCAGCTATAGAT 72 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||| |||||||| ||| |||| | | |||||| ||||||| Sbjct 71 CGTAGGCTTGGTAGGCCATTACCCCCCCAACTCCCTAATC 32 >seq928230 Length=466 Score = 116 bits (128), Expect = 7e-24 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| || |||||||||||||||||| Sbjct 356 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAG 415 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAG 107 |||||||| |||||||||||| ||| ||||| | || |||||||| Sbjct 416 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAG 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981791056896