Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1113451 199 9e-49 seq1467250 187 6e-45 seq1361755 147 5e-33 seq485537 147 5e-33 seq30345 127 5e-27 seq737270 89.7 1e-15 seq498275 80.6 6e-13 >seq1113451 Length=536 Score = 199 bits (220), Expect = 9e-49 Identities = 285/392 (73%), Gaps = 11/392 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||||||| | || || ||| | | Sbjct 102 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGACTCACCCTGCGCCGATGAACGTTGCG 161 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | |||| |||||| |||||| | |||| ||| | | || |||| ||| | Sbjct 162 CAGGAAACCTTGGGCTTTCGGCGAAGTAGATTTTCACTACTTTTATCGTTACTTATGTCA 221 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 |||||| |||| | || | ||||| || || || | || ||||| | || ||| Sbjct 222 GCATTCGCACTTCTGAT-ACCTCCAGCAAACT-TCTCAGTTCACCTTCAACGGCTTACAG 279 Query 178 GACGCTCCCCTACCCAACCACACAGGTTGC---CACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||| ||||| | | | | |||| | ||||||||||| ||||| |||| Sbjct 280 AACGCTCCTCTACCATGCAATAAA--TTGCATCCGCAGCTTCGGCGCTATACTTA-GCCC 336 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || || || || |||| || ||| || |||||||||||||||| ||||| |||| | Sbjct 337 CGTTAAATCTTCCGCGCAGACAAACTAGATCAGTGAGCTATTACGCTTTCTTTAAAGGGT 396 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| |||||||||||||| ||||||| | |||||||| ||||||||| ||| Sbjct 397 GGCTGCTTCTAAGCCAACCTCCTGATTGTCTAAGTCGATCCACATCGTTTCCCACTTAGT 456 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 |||| ||||||||||||| | |||||| Sbjct 457 ATAGACTTGGGGGCCTTAGCTGGCGGTCTGGG 488 >seq1467250 Length=888 Score = 187 bits (206), Expect = 6e-45 Identities = 290/405 (72%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | | || ||| | | Sbjct 107 CGACTACGCTTTTCAGCCTCGCCTTAGGGACCGACTAACCCTGCGTCGATTAACGTTGCG 166 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATT--CCCACCCGTCACACGCTACTCATGCC 118 | |||| |||||| |||||| | | || | ||||| | | || |||||||| | Sbjct 167 CAGGAAACCTTGGTCTTTCGGCGTGGGTGTTTTTCACACCCATTAT-CGTTACTCATGTC 225 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | || | || |||||| || ||| Sbjct 226 AGCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCACAGGCTTACA 283 Query 177 CGACGCTCCCCTACCCAACCACAC-AGGTTGCCAC----AGCTTCGGCGGATAACTTAAG 231 ||||||| ||||| | || | | | || || |||||||| | || || || Sbjct 284 GAACGCTCCTCTACCGCATCATCCGAAGATGATACCCGTAGCTTCGGTGTATGGTTTGAG 343 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| ||| Sbjct 344 CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAG 403 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| ||||||||||||| | |||||| || ||||||| ||||||||| Sbjct 404 GGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTT 463 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || |||| ||| |||||||||| | |||||| ||||||||| Sbjct 464 AACCATAACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCT 508 >seq1361755 Length=717 Score = 147 bits (162), Expect = 5e-33 Identities = 280/403 (69%), Gaps = 16/403 (4%) Strand=Plus/Minus Query 3 ACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCT 62 ||||| ||| |||| |||| ||||| ||||||| |||| || || | | | | Sbjct 495 ACTACCCCTTTCGGGTTCGCGTTAGGTCCCGACTAACCCTCAGCTGATTAGCATAGCTGA 436 Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGC 121 |||| |||| | |||| | |||| ||| | |||| | || |||| |||||| | Sbjct 435 GGAAACCTTAGTCTTTCGGTGTGCGGGTTTCTCGCCCGCATTATCGTTACTTATGCCTAC 376 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCA---CCACTGACACG 178 ||| || | | | | |||||| || || || | || ||||| ||||| || Sbjct 375 ATTTTCTTTTGTAGCTACTCCAACATACC-TCGCAGTACATCTTCAACGCCACT---ACA 320 Query 179 ACGCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCT 238 | ||||||||||| | ||| || ||| |||||||| | ||||| |||| | Sbjct 319 ATGCTCCCCTACC-ACTTTTACAAGT--CCATAGCTTCGGTAGTATACTTATGCCCGATT 263 Query 239 ACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGC 297 | ||||| || || | || ||| |||||||| ||||||||||||| || || |||| Sbjct 262 A--TTATCCATGCAAAACCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGC 205 Query 298 TGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC--CCACTGAGTC 355 ||||||||||||||| |||| | ||||| ||| | ||| | ||| | ||| ||| Sbjct 204 TGCTTCCAAGCCAACATCCTAGCTGTCTGTGCAGTTTCACCGCGTTTATTCAACTTAGTA 145 Query 356 ACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || ||| |||||||||||| |||||| ||||||||||| Sbjct 144 TACATTTGGGGACCTTAGCTGATGGTCTGGGTTGTTTCCCTCT 102 >seq485537 Length=371 Score = 147 bits (162), Expect = 5e-33 Identities = 172/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 174 ACACGACGCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233 |||| ||||||| ||||| || || | | | | ||||||||| || ||| |||| Sbjct 323 ACACTACGCTCCGCTACCATGCCTTACGGCATCCTA-AGCTTCGGCTCATGGCTTGAGCC 265 Query 234 CCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTTC 288 ||| ||||| ||| ||| | | |||| |||||||||||| |||||| ||||| Sbjct 264 CCGTTACATCTTCGCCGCAGGACAACTTATTTAGACCAGTGAGCTGTTACGCTATCTTTA 205 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 ||||||||||||||| ||||||||||||||||||| | | |||| | |||||||| Sbjct 204 AAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGTCGTCCCACCTGCTTTCCCA 145 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 || || || | || |||||||||| | | || ||| |||||||||||| Sbjct 144 CTTAGCCATGAATTGGGGGCCTTAGTCGTAGGTCAGGGTTGTTTCCCTCTC 94 >seq30345 Length=304 Score = 127 bits (140), Expect = 5e-27 Identities = 213/301 (71%), Gaps = 13/301 (4%) Strand=Plus/Minus Query 31 CCGACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGATAATCGGCGGACGGGA 90 ||| || |||| | || || ||| | | | |||| ||||| |||||| | ||| Sbjct 299 CCGGCTAACCCTGCGCTGATTAACATTGCGCAGGAAACCTTGATCTTTCGGCGAAGGGGT 240 Query 91 TTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACTCGCATCAACTCCACCACAC 149 || ||||| | | || |||||||| | ||||||||||| | | ||||| || Sbjct 239 CTCTCACCCCTTTTATCGTTACTCATGTCAGCATTCTCACTTCCGATACCTCCAGCATGG 180 Query 150 AGTCACCCGGCAGCTTCACCA-CTGACACGACGCTCCCCTACC-CAACCA---CACAGGT 204 || |||| || |||||| || || ||||||| ||||| | || ||| Sbjct 179 -GTTACCCCACACCTTCACAGGCTTACGGAACGCTCCGCTACCGCGTGCAATGCAC---- 125 Query 205 TGCCACAG-CTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGA 263 ||| | |||||| || ||||||||| | |||||| ||||||| | | ||||| Sbjct 124 -GCCCGTGTCTTCGGTAAATGGCTTAAGCCCGGGTACATTTTCGGCGCATGAGCGCTTGA 66 Query 264 CCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGT 323 |||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct 65 CCAGTGAGCTGTTACGCTATCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGT 6 Query 324 C 324 | Sbjct 5 C 5 >seq737270 Length=418 Score = 89.7 bits (98), Expect = 1e-15 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCT 342 ||||| |||| | |||||||| ||||||||||||| | ||||| || ||||||| | Sbjct 21 TCTTTAAAGGGTTGCTGCTTCTAAGCCAACCTCCTAGCTGTCTGAGCCTTCCCACATCGT 80 Query 343 TTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||||||| | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 81 TTCCCACTTAATGTGTA-TTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 135 >seq498275 Length=373 Score = 80.6 bits (88), Expect = 6e-13 Identities = 78/99 (79%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 301 TTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCAC 360 ||| |||||||| |||||| ||||| || ||||||| ||||||||| ||| | | Sbjct 373 TTCTAAGCCAACATCCTGGCTGTCTGAGCCTTCCCACATCGTTTCCCACTTAGT-AGTAA 315 Query 361 TTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 || ||| ||||||||| | |||||| |||||||||||| Sbjct 314 TTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCTC 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158009964544