Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq184678 158 1e-36 seq1045647 136 3e-30 seq850705 105 5e-21 seq1295283 102 7e-20 seq1007598 98.7 8e-19 >seq184678 Length=326 Score = 158 bits (174), Expect = 1e-36 Identities = 119/140 (85%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| Sbjct 186 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCACCTCGCG 245 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| ||||||||| ||||||||| ||||||| ||||| || ||||||||| Sbjct 246 GCTTGGCAACCCTCTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 305 Query 121 TGAGGACTTGACGTCATCCC 140 ||| |||||||||||||||| Sbjct 306 TGATGACTTGACGTCATCCC 325 >seq1045647 Length=507 Score = 136 bits (150), Expect = 3e-30 Identities = 95/108 (88%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 54 CCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATA 113 ||||||| ||| || ||||||||||| |||||||| ||||||| |||||||| | || Sbjct 507 CCTCGCGAGTTCGCTGCCCTCTGTATACGCCATTGTAGCACGTGTGTAGCCCTACTCGTA 448 Query 114 AGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 447 AGGGCCATGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTGTCAC 400 >seq850705 Length=444 Score = 105 bits (116), Expect = 5e-21 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||| ||| |||| ||| | | ||| ||||| |||||| Sbjct 151 TCGAGTTGCAGACTCCGATCCGAACTGTGATATGGTTTATAG-ATTCGCTCCAACTCGCG 93 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || | ||| |||||||||| ||||||| ||||| | |||||||| Sbjct 92 TTGTGGCTGCTCATTGTCCATACCATTGTAGCACGTGTGTAGCCCAGGACGTAAGGGCCG 33 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || |||||||||||||| |||||||| Sbjct 32 TGATGATTTGACGTCATCCCCTCCTTCCTC 3 >seq1295283 Length=650 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| || Sbjct 465 CCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCACA 406 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| | || |||| Sbjct 405 CCTTCCTCCCGCTTATCAC 387 >seq1007598 Length=493 Score = 98.7 bits (108), Expect = 8e-19 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||| Sbjct 4 ACGTGTGTAGCCCAGGCCGTAAGGGCCATGATGACTTGACGTCATCCCCACCTTCCTCCG 63 Query 153 GTTTGTCAC 161 ||||||||| Sbjct 64 GTTTGTCAC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409295869320