Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq905361 123 2e-26 seq1557224 118 7e-25 seq1049466 116 3e-24 seq943070 96.9 2e-18 >seq905361 Length=459 Score = 123 bits (136), Expect = 2e-26 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 262 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGCTCTA 321 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | |||| | |||| || |||||| | ||| |||||||||||| Sbjct 322 CTTTCGTACCTGATCGACTTGTAGGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 379 >seq1557224 Length=1184 Score = 118 bits (130), Expect = 7e-25 Identities = 111/139 (80%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||| || | | ||||||||||||||| |||| Sbjct 720 TACCTTTTATCCGTTGAGCGATGGCCCTACCGTATAGCGCCACCGGATCACTAGAACCTA 779 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| | |||||| | |||| ||||||| | |||||| ||| ||| ||||||| | Sbjct 780 CTTTCGTACCTGCTCGACTTGTCAGTCTCGCAGTTAAGCACCCTTATGCTCTTGCACTCA 839 Query 120 TCACTACGATTTCCGACCG 138 | | |||| |||||||| Sbjct 840 TTGC-GCGATGTCCGACCG 857 >seq1049466 Length=509 Score = 116 bits (128), Expect = 3e-24 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 19 CGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAG 78 |||||||||||||||||| | |||||||||||||||||||| |||||| | |||||| | Sbjct 509 CGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTGCTCGAC 450 Query 79 TTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTACGATTTCCGACCG 138 ||| ||||||| | |||| ||| | ||||| ||||| | |||||| |||||||| Sbjct 449 GTGTCTGTCTCGCAGTTAAGCTGGCTTCTACCATTACACTAACCATACGATGTCCGACCG 390 Query 139 TA 140 || Sbjct 389 TA 388 >seq943070 Length=471 Score = 96.9 bits (106), Expect = 2e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACC 58 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 414 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346510265200