Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq417700 307 3e-81 seq1551677 289 8e-76 seq532890 251 2e-64 seq266828 241 4e-61 seq928230 208 2e-51 seq334411 159 1e-36 seq933635 143 8e-32 seq378920 123 7e-26 >seq417700 Length=360 Score = 307 bits (340), Expect = 3e-81 Identities = 268/332 (81%), Gaps = 1/332 (0%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 |||| || ||||||| |||||| ||||| ||| ||||||| | |||||| |||| | Sbjct 23 CCCGGGTTTGATTAGGGAGTTGGGGGGGTAATGGCCTACCAAGCCTACGATCTATAGCTG 82 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 | || || ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 83 GTTTTAGGGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 142 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||| ||||| || ||||||||| ||||||||| ||| | |||||||| | ||| Sbjct 143 AGCAGTGAGGAATCTTAGACAATGGGCGCAAGCCTGATCTAGCCATGCCGCGTGTGTGAT 202 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||||||| |||||||||||| || || || || ||||||||| ||| || | | Sbjct 203 GAAGGCCTTAGGGTCGTAAAGCACTTTCGCCAGAGATGATAATGACAGTATCTGGTAAAG 262 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 || |||||||||||| |||||||||||||||||||||||| |||||| ||||||| | || Sbjct 263 AAACCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCG 322 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||||| |||||||||| | || ||| || Sbjct 323 GAATTACT-GGGCGTAAAGCGCACGCAGGCGG 353 >seq1551677 Length=1159 Score = 289 bits (320), Expect = 8e-76 Identities = 274/355 (77%), Gaps = 25/355 (7%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||||||| ||||| ||||| || ||||| ||||||||| ||||| | ||||||| Sbjct 780 ATTAGCTAGATGGTAGGGTAAGAGCCTACCATGGCGACGATTGGTAGCTGGTTTGAGAGG 839 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| ||||||| || |||||||||||| || |||||||||||||||||||||||||| Sbjct 840 ATGATCAGCCACATCGGGACTGAGACACGGCCCGAACTCCTACGGGAGGCAGCAGTGGGG 899 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||||||| ||||||||| ||||||||| |||||| ||||||| | || ||||||| | Sbjct 900 AATATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCCTA 959 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGATAA------------------------TGAC 383 |||| ||||||| || | ||| ||||| || |||| Sbjct 960 GGGTTGTAAAGCACTTTTGTCAGAGAAGAAAAAGCGTTACTTAATACGTGACGCCTTGAC 1019 Query 384 GGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 |||| ||| || |||| |||||||||| |||||||||||||||||||||||| |||| Sbjct 1020 GGTATCTGAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGT 1079 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 || ||||||| |||||||||| |||||||||| | | ||| ||||| ||||| Sbjct 1080 GCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCACACAGGCGGTTTGTTAAG 1133 >seq532890 Length=379 Score = 251 bits (278), Expect = 2e-64 Identities = 171/192 (89%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||||| |||| ||||||||||||||| |||| | ||||||| Sbjct 267 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAG 208 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 207 GATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 148 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||||||||||||| |||||||||||||| | |||||||| || ||||||||| Sbjct 147 GAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTT 88 Query 347 CGGGTCGTAAAG 358 ||||| |||||| Sbjct 87 CGGGTTGTAAAG 76 >seq266828 Length=337 Score = 241 bits (266), Expect = 4e-61 Identities = 174/201 (87%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 ||||||| |||||||| |||||| |||||| |||| ||||||||||||||| |||| | Sbjct 137 CCCGCGTTAGATTAGCTTGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCTATAGCTG 196 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 |||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 197 GTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 256 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 |||||||||||||||||| |||||||| ||||||||| ||||| | |||||||| | || Sbjct 257 AGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCCATGCCGCGTGTGTGAA 316 Query 338 GAAGGCCTTCGGGTCGTAAAG 358 |||||||||||||| | |||| Sbjct 317 GAAGGCCTTCGGGTTGAAAAG 337 >seq928230 Length=466 Score = 208 bits (230), Expect = 2e-51 Identities = 226/302 (75%), Gaps = 21/302 (7%) Strand=Plus/Minus Query 219 CCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA 278 |||||||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||| Sbjct 463 CCTGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCA 404 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATG 338 |||||| ||||||||| ||||||||| ||||||||| |||| | |||||||| || | Sbjct 403 GCAGTGAGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGCAGGAAG 344 Query 339 A-AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA------------------- 378 | | ||| |||| ||||| || | | ||||||| | Sbjct 343 ACTGCCCTATGGGTTGTAAACTGCTTTTATACAGGAAGAAACCTTTTCACGTGTGAGAAG 284 Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 |||||||||| | || ||| ||||||||| |||||||||||||||||||||||| Sbjct 283 CTGACGGTACTGTAAGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGG 224 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||| | ||||||||||||||| | | ||| |||||||| ||||||||| | ||||| Sbjct 223 AGGATCCAAGCGTTATCCGGAATCA-TTGGGTTTAAAGGGTCCGTAGGTGGATAATTAAG 165 Query 499 TC 500 || Sbjct 164 TC 163 >seq334411 Length=348 Score = 159 bits (176), Expect = 1e-36 Identities = 111/126 (88%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| ||||||||||||||| ||||| |||| ||||||||||||||| ||| | | ||| Sbjct 127 GTCGGATTAGCTAGTTGGTGGGGTAATGGCTCACCAAGGCGACGATCCGTAACTGGTCTG 68 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| | |||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 67 AGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG 8 Query 283 TGGGGA 288 |||||| Sbjct 7 TGGGGA 2 >seq933635 Length=468 Score = 143 bits (158), Expect = 8e-32 Identities = 174/241 (72%), Gaps = 26/241 (11%) Strand=Plus/Minus Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| Sbjct 468 GGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGT 409 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAAT----------- 380 |||||| | ||||||| || | ||| || |||| Sbjct 408 CTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTAAATTAATACTTTGCTGTT 349 Query 381 --GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 |||| ||| || |||| |||||||||| |||||||||||||||||||||| Sbjct 348 TTGACGTTACCGACAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAG 289 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| || ||||||| |||||||||| |||||||||| | |||||||||||| ||||| Sbjct 288 AGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAG 230 Query 499 T 499 | Sbjct 229 T 229 >seq378920 Length=354 Score = 123 bits (136), Expect = 7e-26 Identities = 117/148 (79%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 353 GTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACT 412 ||||| | || || || |||||| ||||||||||| || || |||| |||| |||| Sbjct 1 GTAAACCGCTTTCAGCAGGGAAGAAAATGACGGTACCTGCAGAAGAAGGTGCGGCCAACT 60 Query 413 ACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGT 472 ||||||||||||||||||| | ||||||| | |||||| |||||| ||| | |||||| Sbjct 61 ACGTGCCAGCAGCCGCGGTGACACGTAGGCACCAAGCGTTGTCCGGATTTA-TTGGGCGT 119 Query 473 AAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | |||||| ||||| |||||| Sbjct 120 AAAGAGCTCGTAGGCGGTTTAGTAAGTC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1472686585344