Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1663180 210 4e-52 seq1189799 192 1e-46 seq1630659 188 1e-45 seq1595707 98.7 2e-18 seq388233 80.6 5e-13 seq755053 77.0 6e-12 >seq1663180 Length=5304 Score = 210 bits (232), Expect = 4e-52 Identities = 205/258 (79%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | |||| || ||||| || | ||| |||||||||||||||| Sbjct 3842 CTTCTTAGAGGGATAAGCGGCGTCTAGCCGCACGA-GAAAGAG-CAATAACAGGTCTGTG 3899 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||| ||| | ||| || | | ||| Sbjct 3900 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAATGAAGGGACCAGCGCGCT-ATCC 3958 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | ||| |||| ||||||| | | |||| | || | | ||||| | | |||| Sbjct 3959 CCCT--CCGAAAGGAGTGGGTAACCGAATGAAACCCCTTCCCGATAGGGATTGGGGATTG 4016 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||||||| |||||||||| Sbjct 4017 CAATTGTTTCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATT 4076 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 4077 ACGTCCCTGCCCTTTGTA 4094 >seq1189799 Length=577 Score = 192 bits (212), Expect = 1e-46 Identities = 202/260 (78%), Gaps = 8/260 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGA--AGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||| | | || || | || | || ||||| ||||||||||||||| Sbjct 324 CTTCTTAGAGGGATGAGCAGCAAGTGCAGCTGCAGGAGATTGAG-CAATAACAGGTCTGT 266 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||||||||||||||||||||||||||||| || | | || || | Sbjct 265 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAAGGGTTAGCGGGT---CC 209 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATC-TTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||| ||| ||| ||| |||| || |||| || || || | ||||| | | | Sbjct 208 ACCTTCTCCGAGAGGAGCGGGAAATCGCTGCAAAAC-CTTTCATGATTGGGATTGGGGCT 150 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| || | | | |||||||||| || ||||||||| ||||||||| ||||||| Sbjct 149 TGCAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCAAGTCATCAGCTTGCGTTGA 90 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| |||||||||||||||| Sbjct 89 TTAAGTCCCTGCCCTTTGTA 70 >seq1630659 Length=1821 Score = 188 bits (208), Expect = 1e-45 Identities = 199/257 (77%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||| | ||||| || | ||| ||||| ||||||||| Sbjct 396 CTTCTTAGAGGGACACGCGGCGTTTAGCCGCACGA-GACAGAG-CAATAGTAGGTCTGTG 339 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||| ||| || || || || | | Sbjct 338 ATGCCCTTAGATGTCCAGGGCCGCACGCGCGCTACAATGAAGGAATCAGCGTGTGCTTTC 279 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | ||| ||| |||||||| | | || ||| ||||||| ||||||| ||| Sbjct 278 CCT-GTCCGACAGGACTGGGTAACCCGTTGAACCTCCTTCGTGCTTGGGATAGGCGTTTG 220 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||| ||| |||||||||| || |||||||||| ||||||||| || ||||||| Sbjct 219 TAATTATCCGCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGTGTTGATT 160 Query 311 ACGTCCCTGCCCTTTGT 327 ||||||||||||||||| Sbjct 159 ACGTCCCTGCCCTTTGT 143 >seq1595707 Length=1411 Score = 98.7 bits (108), Expect = 2e-18 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||| ||||||||||||||||||||||||||| |||| | |||||| ||| | Sbjct 498 GCAATAACATATCTGTGATGCCCTTAGATGTTCTGGGCTGCACACAGGCTACAATGAAGG 439 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 ||| | | | ||| |||| | |||| ||||||| | |||||| || | Sbjct 438 GACCAGCACGCT-ATCCCCTT---CTAAAGGAGTGGGTAACTGAATGAAACTCCTTCTGG 383 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 | ||||| | | |||||| || || | | | || ||| ||| || |||||||| | ||| Sbjct 382 ATAGGGATTGGGGATTGCAGTTGTTTCCCATGAATGAGAAATTCCCAGTAAGCGTGAGTC 323 Query 294 ATCAG 298 ||||| Sbjct 322 ATCAG 318 >seq388233 Length=356 Score = 80.6 bits (88), Expect = 5e-13 Identities = 57/64 (89%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 121 CAGGTCTGTGATGC-CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAA 179 |||||||||||||| ||||| ||||||||||| |||||||| ||||||||| |||||| Sbjct 146 CAGGTCTGTGATGCTCCTTAAATGTTCTGGGCTGCACGCGCACTACACTGATTCAGCCAA 87 Query 180 CGAG 183 |||| Sbjct 86 CGAG 83 >seq755053 Length=422 Score = 77.0 bits (84), Expect = 6e-12 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 1 TAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 47 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931442797568