Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1644865 196 4e-45 seq1409350 95.1 9e-15 >seq1644865 Length=2180 Score = 196 bits (216), Expect = 4e-45 Identities = 497/751 (66%), Gaps = 9/751 (1%) Strand=Plus/Plus Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 ||||| |||||||| ||||| |||| |||||||| || ||||| || || ||||| Sbjct 35 TGAACGTCATTTCATCTCCCATGTTCTGGCATTCTTTGCTGCATCGGATGGAATTGTCAA 94 Query 61245 TGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||||| || |||| | ||| || ||| | ||||| | || || | | || || Sbjct 95 CGAGAACTTGGTGGAGAGGTTCTGCCAAGAGATTCAAGTTCCTGAAGCAAGGTTCTTTTA 154 Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATAC 61364 ||| ||||||||| || || || || ||| || ||||| ||| | || |||||||| Sbjct 155 CGGTTTCCAGATTATGATCGAAAACGTTCACAGTGAAATGTATAGTTTACTGATCGATAC 214 Query 61365 GTACATCAGGGAGCGGGCGGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCG 61422 || || || | ||| ||||| | || || |||||||| || | || Sbjct 215 CTATATATCTGATCCTAAAGAAAA--AACGAAACTCTTTAACGCCATCGAAACTCTCCCA 272 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT 61482 || || |||||| || ||||| || |||||| || | | ||| | | Sbjct 273 TGTGTCAAAAAGAAAGCCGACTGGGCTTTATGTTGGATTGGCAATGAAGAAGCTTCTTAC 332 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 | ||| || | | || ||||| || || || |||||||||||||||| ||||| Sbjct 333 GCCGAAAGAGTTGTTGCGTTTGCCTCTGTTGAAGGGATATTTTTCAGTGGATCTTTTGCT 392 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 || || |||||| | ||||| | ||||| ||||| || || || || || || || | Sbjct 393 GCTATTTTTTGGCTCAAGAAGAGAGGACTGATGCCAGGACTTACTTTTAGTAACGAACTT 452 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTG 61662 ||||| | || || || | ||| ||||| || || | || || | ||||| Sbjct 453 ATATCTAGGGATGAAGGTCTTCATACCGATTTCGCGTGCTTAATGTTTAAGC---ATCTG 509 Query 61663 GTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAA 61722 || ||| || |||| ||| || || || || || || | || ||| Sbjct 510 GTTAATAAACCTAGTAAGGAAACTGTCACGGAAATAATTACAGACGCCGTTTCAATTGAA 569 Query 61723 CAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATG 61782 || ||||| | || || || |||||||| | || || || ||||||||| | ||||| Sbjct 570 CAAGAATTCTTAACAGATGCATTGCCCGTTGCTCTAATTGGAATGAATTGTACATTAATG 629 Query 61783 TCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGG-TATGAAGCGGAT 61841 ||||| ||||||||||| ||||| | || || | || ||||| | |||| | | Sbjct 630 AAACAGTACATTGAATTTGTCGCCGATAGACTTTTAATAGAGTTGGGATGTGAAAAGCA- 688 Query 61842 CTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAA 61901 |||||| |||| || || || |||||||| | ||||| || || || || || || Sbjct 689 CTATAAAGTTGAAAATCCTTTAGACTTCATGGAGAATATTTCCCTCGAAGGGAAAACTAA 748 Query 61902 TTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 ||| || ||||| | ||||| || |||||| Sbjct 749 TTTCTTTGAGAAGAGAGTAGGTGAATATCAA 779 >seq1409350 Length=781 Score = 95.1 bits (104), Expect = 9e-15 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 66038 TCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCC 66097 || || |||| ||| | || || ||||| ||||||||||| ||| ||| |||||| Sbjct 170 TCATCCGGAGACGTAAATTCCACGATTTCTGTGCACAGATTGGAGCACTTTATTGTGCCC 229 Query 66098 AAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCG 66157 || || | || || ||||| || ||||| || |||||||||| ||| |||||||| ||| Sbjct 230 AAGTTATTCTGGTTGCTCTTCCGGTTGCAAGCGTCCTTGTACAACATATACGGAGTCCCG 289 Query 66158 GTCTCAA 66164 || |||| Sbjct 290 GTTTCAA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389507472299840