Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq1006472 156 1e-33 seq1240714 152 2e-32 seq1289357 114 4e-21 >seq1006472 Length=492 Score = 156 bits (172), Expect = 1e-33 Identities = 204/277 (74%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 2497 TACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAA 2556 ||| | | ||||||| || | || ||||| | | || ||||| |||||||| ||| Sbjct 210 TACTTAGCAGAATTGTCTAGCCGTTATCCAATTGTTTCAATTGAAGACGGTATGGATGAA 269 Query 2557 AACGACTGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTT 2616 | ||||||||||| |||||| | || || | |||||| |||||||||| | || Sbjct 270 AGTGACTGGGACGGCTGGAAAGAGTTAACAGACCTGATTGGTGATAAAGTTCAACTTGTC 329 Query 2617 GGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAA-AAGGTATTGCAGAACACGC 2675 |||||||| | ||||||||||||||| | ||||||| ||||||| | | || | Sbjct 330 GGTGACGATCTGTTCGTAACTAACACT-AAAATCTTGAAAGAAGGTATCG-ATAAATCTA 387 Query 2676 T-GCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACG 2734 | | ||||||||| | ||||| | || |||||||| || ||| ||||||| |||| | Sbjct 388 TCGGTAACTCAATTTTAATCAAGTTCAATCAAATCGGCACATTGTCTGAAACACTTGATG 447 Query 2735 CTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGT 2771 ||||| ||||||| |||| || ||||| || ||||| Sbjct 448 CTATCAAAATGGCTCAAGACGCAGGATATACTGCAGT 484 >seq1240714 Length=608 Score = 152 bits (168), Expect = 2e-32 Identities = 386/575 (67%), Gaps = 28/575 (5%) Strand=Plus/Minus Query 2266 ACAGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTT 2325 ||||| || || || ||||||||||| ||||| ||| || || || ||||||| | Sbjct 563 ACAGCTGTTGGCGATGAAGGTGGTTTTGCACCAACTTTAGAAGGTACCGAAGATGCACTA 504 Query 2326 GAAACTATCATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATC 2385 || ||||| | |||| | || ||| || ||| ||| | || || || || Sbjct 503 GATACTATTAAACAAGCCGTTGACAATGCCGGTTATACTTTAGGCGATGATGTGTTGATT 444 Query 2386 GGACTTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACT 2445 | | || || || | | ||||| || | || || | || |||||| ||||| Sbjct 443 GCTTTAGATTGCGCTGCCGCGGAATTTTATG-TG--GATGGCAA---TTACGATTACACC 390 Query 2446 AAATTTGAAGGTGAAGGCGCTGCT-GTTCGTACTGCTGCA--GAACAAATCGACTACCTT 2502 |||||||||||||| | | || || || || ||| |||||| || || | Sbjct 389 AAATTTGAAGGTGA-GTCAGGGCAAGTACGCTCTA--GCAAGGAACAAGCAGATTATTTA 333 Query 2503 GAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGAC 2562 | ||| | | || || || ||||| | || |||||||| ||||| ||||| ||| Sbjct 332 GCCGAACTTTGCGAGAAGTATCCTATCATTTCCATTGAAGATGGAATGGATGAAAATGAC 273 Query 2563 TGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGAC 2622 ||||| |||||||||| | |||||| | || | |||||| ||||||||||| ||| Sbjct 272 TGGGATGGTTGGAAATACTTAACTGAAAAAGTAGGCGATAAAGTACAATTGGTTGGAGAC 213 Query 2623 GACTTCTTCGTAACTAA----CACTGCTTACCTTGAAAAAGGTATTGCAGAACACGC--T 2676 || || || ||||| || | ||||| || |||||||| || || || | Sbjct 212 GATTTATTTGTAACCAATGTTGAACGCTTATCT----AAAGGTAT--CAAAAACGGCATT 159 Query 2677 GCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCT 2736 || || ||||| ||||||||||| ||||||||||| || | || ||||| ||| || Sbjct 158 GCCAATTCAATTCTTATCAAAGTCAACCAAATCGGAACGCTAACGGAAACAATTGCAGCC 99 Query 2737 ATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCA--CACCGTTCAGGTGAAA 2794 || | ||||| ||| | | || || || | || ||| | ||||| || ||||||| Sbjct 98 GTCAATATGGCTAAAAATTCAGGCTATACCTCGGT--TATGAGTCACCGCTCTGGTGAAA 41 Query 2795 CTGAAGATTCAACAATCGCTGATATTGCAGTTGCA 2829 | |||||| || || || ||| | || || ||| Sbjct 40 CGGAAGATAGTACGATTGCCGATTTAGCCGTGGCA 6 >seq1289357 Length=645 Score = 114 bits (126), Expect = 4e-21 Identities = 252/375 (67%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 || ||||| || || | |||||||| |||||||| ||||||| |||||||| ||| | Sbjct 406 AACTACCCCATTATTTCCATCGAAGACGGTATGGATCAAAACGATTGGGACGGCTGGGAT 347 Query 2578 TCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACT 2637 | | ||| || ||||| ||| ||||||| |||||||| || || || || ||| Sbjct 346 ATTTTAACTAAAAAGATTGGTAATAATATTCAATTAGTTGGTGATGATTTATTTGTCACT 287 Query 2638 AACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAA 2697 || ||| || || | ||||||| || | ||||| | || | || ||| Sbjct 286 AATACTAAAATATTTAAAGAGGGTATTGATAAAAATATCGCTAATGCTATATTAATAAAA 227 Query 2698 GTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGA-AGC 2756 || ||||| || || || || || || ||||| | || || || | || ||||| ||| Sbjct 226 GTAAACCAGATTGGAACGTTAACCGAGACTTTAGCAGCAATAAAACTAGCTAAAGACAGC 167 Query 2757 TGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGA 2816 || || | || || ||||| ||||||||||| ||||| | ||||| || || Sbjct 166 AACTATCAATCCATT-GTTTCTCACCGCTCAGGTGAAACCGAAGACACGACAATAGCCGA 108 Query 2817 TATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCG 2876 | | | || || || | | ||||| |||||||| || |||| || | || || Sbjct 107 TTTAGTTGTAGCTACGGAATCAACACAAATAAAGACAGGCTCGTTGTGTCGCTCAGATCG 48 Query 2877 TATTGCTAAATACAA 2891 | || |||||||| Sbjct 47 GGTGGCCAAATACAA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152955903928464