Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1190 268 1e-69 seq1236 132 7e-29 >seq1190 Length=154610 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 149111 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 149168 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| || ||||| |||||| Sbjct 149169 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 149228 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| ||||| ||| ||||| || | ||||||||||||||||||| Sbjct 149229 ACCCAATCCTTTCGGATAAGGTTATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCG 149288 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 149289 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 149337 >seq1236 Length=109634 Score = 132 bits (146), Expect = 7e-29 Identities = 192/260 (74%), Gaps = 12/260 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| |||||| || ||||| ||| ||| | Sbjct 34264 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTA-ATGACTTGCACTTACCAGGGATT-C 34321 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-AT--TTCAAAGA 117 |||||| | | || |||||||| | ||||| | |||| | || |||| | Sbjct 34322 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTTACGACGGTCATGATTCA--GT 34379 Query 118 TTACCCGGACCTGTCGGCCAAGGT-GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 |||||| || ||| |||||| | | ||||| |||| | || ||| |||| ||| Sbjct 34380 TTACCCAACTCTTTCGAGCAAGGTCGCCATACTCGCTGAAACCGCCATTGTCGCGCACGT 34439 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCT 235 | ||||| | |||||||||||||||||||||||||||||| ||||| || |||| | || Sbjct 34440 GTGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA--TTTCGTGCGGCT 34496 Query 236 AAAAGGCCATCTCCCTCGAA 255 | || | | |||||| || Sbjct 34497 ATAACCGCTTGTCCCTCTAA 34516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751498544310