Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1190 282 8e-74 seq1236 187 5e-45 >seq1190 Length=154610 Score = 282 bits (312), Expect = 8e-74 Identities = 218/258 (84%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| ||||| | |||||||||||||||||||||||||||||||||| | ||| ||| Sbjct 150013 GGGAACCAGGGATATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTAAAT 149954 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 ||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||| | Sbjct 149953 ACATTAGCATGGAATAATAAAATAGGATGTGTGAACCTATTTTGTTGGTTTCTAGGATCA 149894 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 |||||||||||||||||| ||| ||||| | ||||| || |||||||||||||||| Sbjct 149893 CCGTAATGATTAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAATTC 149834 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| || ||||| ||||||||||||||| | ||||||||| ||||||| |||| Sbjct 149833 TTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTGCCAAGGATGATTTCATTGATCA 149774 Query 301 GTGAACGAAAGTTAGGGG 318 ||||||| |||||||| Sbjct 149773 -AGAACGAAGGTTAGGGG 149757 >seq1236 Length=109634 Score = 187 bits (206), Expect = 5e-45 Identities = 218/285 (76%), Gaps = 12/285 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGC---CAGGACTTTTACTTTGAAAAAATTAGAGT 95 |||| ||| || |||||| |||||| | | | ||||||||||| ||||| |||| Sbjct 35254 ATGCTCTTAACCGGGTGTC---GGGAGCGGACGGCAAGTTTACTTTGAACAAATTTGAGT 35198 Query 96 GTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 | ||||||||||||| ||| ||| | | |||||||||||| ||||||||| | |||| Sbjct 35197 GCTCAAAGCAGGCCTATGCCTGAAAATTCTTGCATGGAATAATGGAATAGGAC-TTCGGT 35139 Query 156 TCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 |||||||||||||||| | ||| ||| |||||| |||| ||||| || |||||| | Sbjct 35138 TCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGTTAAGAGGGACAGACGGGGGCATTT 35080 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG-AAGACTAACTACTGCGAAAGC 273 |||| ||| |||||||||||||| || | || | ||| ||||| |||||||| Sbjct 35079 GTATGGCGGTGTTAGAGGTGAAATTCTATGA-TCATCGTCCGACAAACTAAAGCGAAAGC 35021 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||||||||| ||| | || ||||||| || || Sbjct 35020 ATTTGCCAAGGATGTTTTCATTGATCTG-GAGCGAAAGTCAGAGG 34977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914570031232