Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq39736 289 1e-75 seq59679 77.0 1e-11 >seq39736 Length=4942 Score = 289 bits (320), Expect = 1e-75 Identities = 289/375 (77%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 228 TGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGA 287 ||||||||||||||||||| || || ||||||||||| |||| ||| | | |||| | Sbjct 3728 TGTTCAGGAAGTGACGGTCATGCGAAATGATGATCATGGTGCTGTTACGTTCGTTCAGCA 3669 Query 288 TATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACA 347 | ||||||||||| || || | |||||||| || ||| || ||||||||||||| || Sbjct 3668 CCTGCTCCAGCCAGCGAATAGTATCGATGTCCAGGTTGTTCGTTGGTTCGTCGAGCAGCA 3609 Query 348 GCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGG 407 | | ||| ||||| || ||||| ||||| ||||| | |||||||| || ||||||| | Sbjct 3608 GAATTTCCGGATCCGAGAACAGTGCCTGCGCCAGAAGCACACGCAGTTTAAAGCCCGGCG 3549 Query 408 ACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCT 467 | ||||||||||||||| | || ||||| | ||||| || | ||||||||||| | Sbjct 3548 CGATTTCGCTCATCGGACCATAATGTTGCTCAACAGGAATGCCTACGCCCAGCAGCAGTT 3489 Query 468 CACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGG 527 | |||||||||||||| ||| ||||||||||||| || || | || |||||| || | Sbjct 3488 CGCCGGCACGGGATTCTGCGCTGTAGCCGTCCATTTCACCGTAAGCGACTTCCAGATCAG 3429 Query 528 CCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGG 587 |||| ||||||||||||||||||||||| || | |||||| | || ||||| Sbjct 3428 CCACTTTGTAGCCGTCTTCTTCGCTCATTTCCGCCATGGCGTAAATGCGGTCGCGCTCTT 3369 Query 588 CCTTGACCTTCCACA 602 |||| || | ||||| Sbjct 3368 CCTTCACTTCCCACA 3354 >seq59679 Length=1177 Score = 77.0 bits (84), Expect = 1e-11 Identities = 72/92 (78%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 290 TTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGC 349 |||||||||||| || | || | |||| ||||||||||||||||||||||| ||| Sbjct 457 TTTTCCAGCCAGATGACCGCGTCCAAATCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGT 398 Query 350 ACTTCAGGATCGGAAAACAGCGCCTGGGCCAG 381 | |||| | | ||| ||||||||| ||||| Sbjct 397 AAATCAGAACGGCAAATCAGCGCCTGCGCCAG 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1880264345064