Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1190 100 2e-19 seq1236 96.9 2e-18 >seq1190 Length=154610 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 149062 TCCGAACGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 149118 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||| ||| Sbjct 149119 GGCAGGGACGTAAT-CAACGCATGCT 149143 >seq1236 Length=109634 Score = 96.9 bits (106), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 3/82 (4%) Strand=Plus/Plus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 ||||| |||||||| |||| || ||||||||| ||||||||||| |||||||||||||| Sbjct 34218 AAAGTCCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 34275 Query 103 GGGACGTAATACAACGCAAGCT 124 |||||||||| || |||||||| Sbjct 34276 GGGACGTAAT-CAGCGCAAGCT 34296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300605888120