Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq725 109 1e-21 >seq725 Length=236385 Score = 109 bits (120), Expect = 1e-21 Identities = 271/403 (67%), Gaps = 15/403 (4%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||||||| ||||||||||| | |||||||||||| ||||||||||| || || Sbjct 57410 CGATGGTCAGCAATTCGCCGCCCACTTCGGTCCACGCCAGACCAGTGACCTGGCCCACAC 57351 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | | || || |||| || || || ||||||||||||| | | |||| Sbjct 57350 GGTTTTCGGTATCAGCACGGCCATAATCGACCTTCTGCACGCCGAGGAAATCTTTCAGGT 57291 Query 121 AGTCGGCCGTGACCTTCA----CCGAGAAGCGTTTTTCCAGC-GCATGTTCCTTGACCGC 175 ||| ||||| |||| | || | ||| |||| | ||| || || || || Sbjct 57290 TGTC-GCCGTTGATTTCAATGTGCTTGATGTTTTTATCCATCAGCA-ATTGTTTAACTGC 57233 Query 176 CTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTA 235 || ||||| | || | | || || || | | ||||||||| ||||| ||||| || Sbjct 57232 TTTTCGGCAAAGTTTAGACAACTCACGTTCTAAACTACGCACACCCGCTTCACGGGTATA 57173 Query 236 GTAGCGGACGATGTCGCGGATCGTGCCGACT-TCAAATTCGATC---TCGCCCTTCTTCA 291 | | |||| ||| || || ||| ||| ||| | | || ||| |||||| | Sbjct 57172 GAAACGGATAATGCCGATAAT--TGC--ACTGTCATCTACCGTCAGTTCGTTCTTCTTAA 57117 Query 292 GGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGT 351 | | || | || |||||| ||| | | || |||||||||| | || || | Sbjct 57116 GCGCGTTACGCTCAAGCTGCTTCGGCAGCAAATGCTGTTTGGCGATGTTCAGTTTTTCAT 57057 Query 352 CTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 ||||||| || |||| || || ||||||||||| ||||| || Sbjct 57056 CTTCGGTATAGCCCGAAAGACGGATCACTTCCATACGGTCAAG 57014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157602626944