Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1190 187 3e-45 seq1236 113 5e-23 >seq1190 Length=154610 Score = 187 bits (206), Expect = 3e-45 Identities = 156/190 (82%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||| | |||||||||||||||||||| ||||||||||||| | ||| |||| Sbjct 150012 GGAACCAGGGATATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTAAATA 149953 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||| ||| | ||||||||| ||||||||||| | Sbjct 149952 CATTAGCATGGAATAATAAAATAGGATGTGTGAACCTATTTTGTTGGTTTCTAGGATC-A 149894 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| || ||| ||||| | ||||| || |||| ||||||||||| Sbjct 149893 CCGTAATGATTAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAATTC 149834 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 149833 TTGGATTGAT 149824 >seq1236 Length=109634 Score = 113 bits (124), Expect = 5e-23 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||||||||| ||||| ||| | ||||||||||||| ||| ||| | | |||||| Sbjct 35219 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTATGCCTGAAAATTCTTGCATGGA 35160 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 ||||| ||||||||| | |||||||||||||| ||||| | ||| | |||||| | | Sbjct 35159 ATAATGGAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGTTA 35102 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 | | ||| || |||||| | |||| ||| | |||||||||||| Sbjct 35101 AGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCT 35053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511658583360