Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1190 354 2e-95 seq1236 167 4e-39 >seq1190 Length=154610 Score = 354 bits (392), Expect = 2e-95 Identities = 266/310 (86%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| ||||||||||||| || ||| ||| | | ||||||||| Sbjct 149420 GAACGAGACCTTCTCCTGCTAAATAGCTTGGTTGGCTACGGCTGA-CTAAAGCTTCTTAG 149362 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct 149361 AGGGACTATTAATATTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 149302 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| || Sbjct 149301 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATAACCTTATCC 149242 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct 149241 GAAAGGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 149182 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 149181 GCTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCT 149122 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 149121 GCCCTTTGTA 149112 >seq1236 Length=109634 Score = 167 bits (184), Expect = 4e-39 Identities = 194/258 (75%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | ||| | ||||| ||| || ||| ||||||||||||||||| Sbjct 34520 CTTCTTAGAGGGACAAGCGGTTATAGCCGCACGAAATT-GAG-CAATAACAGGTCTGTGA 34463 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC-A 190 ||||||||||||| | ||||| |||| |||| ||| || | | || ||||| | | Sbjct 34462 TGCCCTTAGATGTCCGGGGCCACACGTGCGCGACAATGGCGGTTTCAGCGAGTATGGCGA 34403 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| || ||| ||||||| || | | | ||||| ||||| | | ||| Sbjct 34402 CCTTGCTCGAAAGAGTTGGGTAAACTGAATCATGACCGTCGTAACTGGGATCGGGGCTTG 34343 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| ||||| Sbjct 34342 CAATTATTCCCCGTGAACGAGGAATCCCTGGTAAGTGCAAGTCATTAGCTTGCGCTGATT 34283 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 34282 ACGTCCCTGCCCTTTGTA 34265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946548004352