Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq14843 412 1e-112 seq1236 280 5e-73 seq1190 239 1e-60 seq4499 159 1e-36 seq27888 158 4e-36 seq23082 158 4e-36 seq27720 156 1e-35 seq1953 150 6e-34 seq2424 147 7e-33 seq1513 145 2e-32 seq29297 89.7 2e-15 >seq14843 Length=30539 Score = 412 bits (456), Expect = 1e-112 Identities = 273/302 (90%), Gaps = 7/302 (2%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC----- 229 ||| || | ||| |||| ||| |||| || | ||||||||||||||| | |||| Sbjct 24540 CCGTTTTACTGAATAAGCAAAGAAACAATGAAGGTAGTGGTATTTCATTGACGCCCAGCC 24481 Query 230 GAAAC--GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287 ||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||| Sbjct 24480 GAAACCAGGCTCCCACTTATTCTACACCCTTCACGTCTCCTCACAAAGTCGGACTAGAGT 24421 Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 24420 CAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTGCCAAGCCCGTTCCCTTGGCTGTGG 24361 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 24360 TTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACT 24301 Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24300 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 24241 Query 468 CG 469 || Sbjct 24240 CG 24239 Score = 109 bits (120), Expect = 2e-21 Identities = 104/134 (78%), Gaps = 7/134 (5%) Strand=Plus/Minus Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-------CGG 236 ||| ||||||| ||||||| | ||||||||||||||| | | | || || Sbjct 21266 TGAGTAAGTAACGAAACGATGAAAGTAGTGGTATTTCACGTTTGGAGGAATTGCTCCCGC 21207 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||| |||| |||| |||| | |||| | |||||||||||||||||| Sbjct 21206 CTCCCACTTATTCTGCACCCCTCATGTCACCTTACAATACCAGACTAGAGTCAAGCTCAA 21147 Query 297 CAGGGTCTTCTTTC 310 |||||||||||||| Sbjct 21146 CAGGGTCTTCTTTC 21133 Score = 105 bits (116), Expect = 2e-20 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||| || || ||||||| || |||| | ||||||||||||||||||| Sbjct 24778 CTTTTACTCCACGCCAGGTTTCTGTCCTGGCTGAGCTCACCTTAGGACACCTGCGTTACC 24719 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117 |||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| Sbjct 24718 GTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACATTGTCTTCA 24668 >seq1236 Length=109634 Score = 280 bits (310), Expect = 5e-73 Identities = 155/155 (100%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29793 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 29852 Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29853 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 29912 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 ||||||||||||||||||||||||||||||||||| Sbjct 29913 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 29947 Score = 167 bits (184), Expect = 8e-39 Identities = 141/174 (81%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-------CGG 236 ||| ||||||| ||||||| | ||||||||||||||||| | | || || Sbjct 29238 TGAGTAAGTAACGAAACGATGAAAGTAGTGGTATTTCACTTTTGGAGGAATTGCTCCCGC 29297 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||| |||| |||| |||| | |||| | ||||||||||||||||| Sbjct 29298 CTCCCACTTATTCTGCACCCCTCATGTCACCTTACAATACCAAACTAGAGTCAAGCTCAA 29357 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct 29358 CAGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCAGTGGTTT 29411 Score = 156 bits (172), Expect = 1e-35 Identities = 94/98 (96%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 22104 TAAGAGAGTCATAGTTAC-CCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTGA 22162 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||| Sbjct 22163 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 22200 Score = 145 bits (160), Expect = 2e-32 Identities = 87/90 (97%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCG 402 || ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 22250 GTAGTTTCACTAGATAGTAGATAGGGACAGATGGGAATCTCGTTAATCCATTCATGCGCG 22309 Query 403 TCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||| Sbjct 22310 TCACTAATTAGATGACGAGGCATTTGGCTA 22339 >seq1190 Length=154610 Score = 239 bits (264), Expect = 1e-60 Identities = 186/222 (84%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 145523 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGCCCCCCTTAGGACACCTGCGTTATT 145582 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 145583 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACAATGTCTTCAACCCGAATG 145642 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| | | ||| |||| | | ||| || || || |||| | ||||||||||| Sbjct 145643 AGCCTGAATAAGACTTTAATACTAAAAAGTGAGACGTTAATCCCAGCTTCGCTTCATTGA 145702 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 |||||||||| ||||||| ||||||||||||||||| |||| Sbjct 145703 ATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCACTGGCGC 145744 Score = 187 bits (206), Expect = 8e-45 Identities = 109/113 (96%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 145977 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTATTTGAATTTCTTCAC 146036 Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 146037 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACACCACTTTCTG 146089 Score = 161 bits (178), Expect = 3e-37 Identities = 93/94 (99%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 144262 AGTAGATAGGGACAGATGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 144321 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||||||||||||||||||||||||||| Sbjct 144322 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 144355 >seq4499 Length=51883 Score = 159 bits (176), Expect = 1e-36 Identities = 96/101 (95%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| | Sbjct 7179 CCTTAAGAGAGTCATAATTACTCCCACCGTTTACCCGCGCTTAATTGAATTTCTTCACAT 7238 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||| Sbjct 7239 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 7279 Score = 122 bits (134), Expect = 3e-25 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 9815 CCGTTTACCCGCGCTTAATTGAATTTCTTCACATTGACATTCAGAGCACTGGGCAGAAAT 9874 Query 519 CACATTGCGTCAACA 533 ||||||||||||||| Sbjct 9875 CACATTGCGTCAACA 9889 Score = 75.2 bits (82), Expect = 4e-11 Identities = 48/51 (94%), Gaps = 1/51 (2%) Strand=Plus/Plus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCAT 393 || ||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 11369 GTAGTTTCGCTAGATACTAGATAGGGACAGATGGGAATCTCGTTAATCCAT 11419 >seq27888 Length=7764 Score = 158 bits (174), Expect = 4e-36 Identities = 92/95 (97%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 7670 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTG 7729 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 ||||||||||||||||||||||||||||||||||| Sbjct 7730 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 7764 >seq23082 Length=18525 Score = 158 bits (174), Expect = 4e-36 Identities = 92/95 (97%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1696 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTG 1755 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 ||||||||||||||||||||||||||||||||||| Sbjct 1756 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 1790 >seq27720 Length=12981 Score = 156 bits (172), Expect = 1e-35 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 12888 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTGAC 12947 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 |||||||||||||||||||||||||||||||||| Sbjct 12948 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 12981 >seq1953 Length=110305 Score = 150 bits (166), Expect = 6e-34 Identities = 91/95 (96%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 21693 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCAGT 21752 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAG-TGGGAA 379 |||||||||||||||||||||||||||| |||||| Sbjct 21753 GGTTTCGCTAGATAGTAGATAGGGACAGATGGGAA 21787 >seq2424 Length=91058 Score = 147 bits (162), Expect = 7e-33 Identities = 86/89 (97%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 3883 CATAGTTACTCCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTGACATTCAGAG 3942 Query 505 CACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||| Sbjct 3943 CACTGGGCAGAAATCACATTGCGTCAACA 3971 Score = 138 bits (152), Expect = 4e-30 Identities = 81/83 (98%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCG 402 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 4006 GTAGTTTCGCTAGATAGTAGATAGGGACAGATGGGAATCTCGTTAATCCATTCATGCGCG 4065 Query 403 TCACTAATTAGATGACGAGGCAT 425 ||||||||||||||||||||||| Sbjct 4066 TCACTAATTAGATGACGAGGCAT 4088 >seq1513 Length=104945 Score = 145 bits (160), Expect = 2e-32 Identities = 87/90 (97%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCG 402 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 90565 GTAGTTTCGCTAGATAGTAGATAGGGACAGATGGGAATCTCGTTAATCCATTCATGCGGG 90506 Query 403 TCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||| Sbjct 90505 TCACTAATTAGATGACGAGGCATTTGGCTA 90476 Score = 140 bits (154), Expect = 1e-30 Identities = 82/85 (96%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 90699 GTTACTCCCGCCGTTTACCCGCGCTTAATTGAATTTCTTCACATTGACATTCAGAGCACT 90640 Query 509 GGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||| Sbjct 90639 GGGCAGAAATCACATTGCGTCAACA 90615 >seq29297 Length=11372 Score = 89.7 bits (98), Expect = 2e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||| |||| ||| || |||||||||||||||||| Sbjct 10852 TGGGAATCTCGTTAATCCATTCATGCGCATCACGAATAAGTTGACGAGGCATTTGGCTA 10794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634074426432