Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq49395 138 2e-30 seq1190 105 1e-20 seq14843 86.0 1e-14 >seq49395 Length=5151 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| |||||||| ||||| ||||| || | |||| | Sbjct 810 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTATTTGCCCCTGTCCGATCGGGCAAT 753 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| | Sbjct 752 GGGGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 693 Query 121 GAA 123 ||| Sbjct 692 GAA 690 >seq1190 Length=154610 Score = 105 bits (116), Expect = 1e-20 Identities = 98/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||| |||||||| ||| | |||| ||| || || | Sbjct 145269 GTACGAGAGGAACCGTTCA-TTCACG-TAATTGGTATTTACATCTGTTTGATAAGACAAT 145212 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| || |||||||||||||||||||||||||||||||||| ||| | Sbjct 145211 GTTGTGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCTA 145152 Query 121 GA 122 || Sbjct 145151 GA 145150 >seq14843 Length=30539 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | ||| || | || | Sbjct 25134 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTATATGTGCCTGGTCGAAAGGCCAAT 25191 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||| | ||||||||||||||||| |||||| Sbjct 25192 GGTGCGAAGCTACCATCTGAGGGATTAGGACTGAACGCCTCTAAGTCCGAATCC 25245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818653733376