Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1190 639 0.0 seq14843 426 5e-117 >seq1190 Length=154610 Score = 639 bits (708), Expect = 0.0 Identities = 450/510 (88%), Gaps = 8/510 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| |||||||||||||||||| || |||||||||||||||||| Sbjct 150099 GTACTCATTCCAATTGTAAGACCCAAAAGAGCCCTACATTGTTATTTATTGTCACTACCT 150158 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| |||| ||||||||||||||||||||||||||| ||||| ||| || |||||| Sbjct 150159 CCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCAATCCTTAGATTTGAGGGCCGTT 150218 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 150219 TCTCAGGCCCTCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 150278 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| | || Sbjct 150279 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGTCAGCA 150338 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||| ||||| | ||||||||||||||| |||| | |||| ||| | |||| Sbjct 150339 CAAGGCCATACGATTTGAAAAGTTATTATGAATCGCCAAATGGACCCGGAGGCCATTGG- 150397 Query 301 TTTTTATCTAATAAATACACCCCT-TC-----CGAAGTCGGGGTTTTTAGCATGTATTAG 354 |||||||||||||||| ||||||| || ||| || | | ||||||||||| Sbjct 150398 TTTTTATCTAATAAATGCACCCCTATCAATAAAGAAAGGGGCTGTCTCGGCATGTATTAG 150457 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150458 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 150517 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| Sbjct 150518 TAATGAGCCATTCGCAGTTTCACTGTATA-ATTGTTTATACTTGGACATGCATGGCTTAA 150576 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 150577 TCTTTGAGACAAGCATATGACTACTGGCAG 150606 >seq14843 Length=30539 Score = 426 bits (472), Expect = 5e-117 Identities = 420/533 (79%), Gaps = 32/533 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||| |||| || || | || | ||| |||| ||| |||||| | ||||||||| Sbjct 30478 GTACTCATTCGAATTGCAGAGCCTCATACGAGTCCTGCATCCGTATTTTTCGTCACTACC 30419 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||||||||||| |||||||||||||||||||||| || | |||||||| Sbjct 30418 TCCCCGTGCCGGGATTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTAGAAATAGTAGCCGT 30359 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 30358 TTCTCAGGCTCCTTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATCACCATGGT 30299 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || | | | |||||||| | ||||||||||||| ||||||| || | |||||| | Sbjct 30298 GAGCAAGTCACTAACCATCGACAATTGATAGGGCAGACATTTGAAAGATTCGTCGCCGAC 30239 Query 240 TCAAGGCC--ATGCGATTCGTTAAGTTATTATGAATCACCA-----------AGGAGC-- 284 ||||||| |||||| | ||||||| || ||| || ||| || Sbjct 30238 ACAAGGCCGACTGCGATCAGCAAAGTTATCCAGAGTCATCACAGAAGGTGACAGGCGCAA 30179 Query 285 -CCCGA--AGGGC-----GTTGGTTTTTTATCTAATAAATACACCCCTT--CCGAA--GT 332 || || | || ||||||| | | |||||||||| ||||| || ||||| || Sbjct 30178 ACCAGAGGAATGCACCTGGTTGGTTCTGT-TCTAATAAATGCACCCATTCCCCGAAAGGT 30120 Query 333 C-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTAC 391 | ||| | | ||||||||||||||||||||||| || ||||||||||||| |||||| Sbjct 30119 CAGGGCATCGTGGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAG-CAGGTAC 30061 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451 ||| || ||| ||| ||||||||||||||||||||| ||||||| || || | | | Sbjct 30060 GATCTAAGGAACCATAGCTGATTTAATGAGCCATTCGCGGTTTCACCGTTTA-AAGGTAT 30002 Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 30001 GTACTTAGACATGCATGGCTAAATCTCTGAGACAAGCATATGACTACTGGCAG 29949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509360331264