Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq35 280 4e-71 >seq35 Length=455554 Score = 280 bits (310), Expect = 4e-71 Identities = 507/740 (69%), Gaps = 6/740 (1%) Strand=Plus/Plus Query 37703 AAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAAC 37762 |||| ||||| || || |||||| ||||| | || || | ||| | || |||||| Sbjct 112179 AAAGCCGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAAC 112238 Query 37763 TTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTAT 37822 || || || || || ||||| || || || ||| | ||| | |||||||| ||| || Sbjct 112239 TTGCAGGAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCAT 112298 Query 37823 GAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTG 37882 ||||| || ||||| | |||||||| || ||| | ||| ||| || || || Sbjct 112299 GAACTCCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTC 112358 Query 37883 ACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAA 37942 | || ||||| |||||||| |||||||||||||| ||||| ||| |||||||| |||| Sbjct 112359 AGCATCTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAA 112418 Query 37943 TGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAA 38002 ||||| | ||| | || ||||| || ||||||||| | ||| || || ||| Sbjct 112419 TGGCGTGCCTGGGGTGCGGCTGACGGCAAGCAAATCGACCAGCTGGCAAATGTGGTTGAA 112478 Query 38003 GAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAA 38062 || | || | | || | || || || | | ||| || ||||| || | ||| Sbjct 112479 CAGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGCGAA 112538 Query 38063 TTGGACGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAAC 38119 |||| ||||| |||| | || || | |||| ||| ||||||||||| ||| || Sbjct 112539 CTGGATAAGATGGCGCTGGCACCTTGCC---ACGCTTTCTTCCAGTTCTATGTGGCCGAC 112595 Query 38120 GGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTT 38179 || ||||| ||| | | | |||||||| |||| || | || |||||||| Sbjct 112596 GGTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGCGATATCTTCCTCGGCTTGCCGTTC 112655 Query 38180 AACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTC 38239 || ||||| |||||||| ||| || ||||||| | || |||||||||||| | || || Sbjct 112656 AATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTG 112715 Query 38240 GGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCG 38299 ||||| | | | || || ||||| || |||||| || || ||||||| || Sbjct 112716 GGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACG 112775 Query 38300 AAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCG 38359 | ||||| |||| || || || || || |||| || ||||| | || || || ||| Sbjct 112776 CATCTGCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCG 112835 Query 38360 CCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCG 38419 | || | ||||| || | | ||| || || || || | || ||||||||||| || Sbjct 112836 GCCTCCTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCT 112895 Query 38420 GCGATTAAAGCACCGGTGGC 38439 || || || ||||| || || Sbjct 112896 GCAATCAAGGCACCTGTCGC 112915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130533214374100