Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq35 167 4e-36
seq6488 87.8 3e-12
>seq35
Length=455554
Score = 167 bits (184), Expect = 4e-36
Identities = 221/304 (73%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 196062 GTAACATGCATCAGTATCACGAACTCTTACAGCAGGTGCTCAGTATCGGCCACGACAAAG 196121
|||||||| | ||||||| || | | ||| | |||||| | ||| | ||||
Sbjct 112123 GTAACATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAG 112182
Query 196122 CTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGC 196181
| ||||||||||| || ||||| ||| | | || |||||||| ||| | |||
Sbjct 112183 CCGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGC 112242
Query 196182 AAGACGGATTCCCGCTGGTCACCACGAAGAAACT-CCATCTGCGTTCCATCATTCATGAA 196240
| || || |||||||||||||| || || | || |||| | || ||||| |||||||||
Sbjct 112243 AGGAAGGTTTCCCGCTGGTCACGACCAA-ACGCTGCCATTTACGCTCCATTATTCATGAA 112301
Query 196241 CTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCT 196300
|| ||||||||||| || || || || ||||| || ||| ||| ||| ||||
Sbjct 112302 CTCCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGC 112361
Query 196301 ATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGG 196360
|||||| |||||||||| ||||| ||| |||| || ||||||||||| ||||| |||
Sbjct 112362 ATCTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGG 112421
Query 196361 CGTG 196364
||||
Sbjct 112422 CGTG 112425
Score = 147 bits (162), Expect = 3e-30
Identities = 225/318 (71%), Gaps = 2/318 (1%)
Strand=Plus/Plus
Query 196778 TTGTCTTGTCAGCTGTATCAGCG-TAGTGCGGATATGTTCCTCGGTGTACCGTTCAACAT 196836
||||| || |||||||| ||||| | |||| |||| |||||||| | |||||||| ||
Sbjct 112602 TTGTCCTGCCAGCTGTACCAGCGCTCATGCG-ATATCTTCCTCGGCTTGCCGTTCAATAT 112660
Query 196837 CGCGTCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGA 196896
||| |||||| ||||| | || ||| |||||||||| || | | | ||| ||
Sbjct 112661 CGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTGGGTGA 112720
Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956
|| || ||||| || || || ||| | ||| ||| |||||||||||| |
Sbjct 112721 TTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACGCATCT 112780
Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAG 197016
|| ||| ||| |||| |||||||| | || || || || |||||||||| |
Sbjct 112781 GCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCGGCCTC 112840
Query 197017 TATCTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGAT 197076
| || |||||||| |||||||| ||||| | | ||| ||||||||||| || || ||
Sbjct 112841 CTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCTGCAAT 112900
Query 197077 TAAAGCCCCGGTGGCTAT 197094
|| || || || |||||
Sbjct 112901 CAAGGCACCTGTCGCTAT 112918
>seq6488
Length=277817
Score = 87.8 bits (96), Expect = 3e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| |||||
Sbjct 123577 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGCCCCGT 123636
Query 3857 CAGTCCTGCCA 3867
| || | ||||
Sbjct 123637 CCGTTCCGCCA 123647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770878545630480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |