Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq223 150 5e-32
seq25848 107 6e-19
>seq223
Length=511576
Score = 150 bits (166), Expect = 5e-32
Identities = 208/291 (71%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 33624 TTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGACC 33683
||| ||||||||||||||||| ||||| | ||| |||||||| | || ||| ||
Sbjct 459585 TTCGGTGGTGTATTTTTCAACGCCAGCCTGATCGGTCCATTTACGGGTTTGCAGTGCGCC 459644
Query 33684 TTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCC 33743
||| | || || || || |||||| | || || || || || | ||| || | |||||
Sbjct 459645 TTCGATGTAGACCTGAGAACCTTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCC 459704
Query 33744 AAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATT 33803
|| | || || ||||||||||| |||| || || | ||| || || || || |||
Sbjct 459705 GAACAACACCACACGGTGCCATTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACG 459764
Query 33804 CCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCG 33863
||| || || || || | || | ||||||||| |||||||| || |||||||| ||
Sbjct 459765 CCAGCTCTCAGACGTTGCCAGAGTGATGTTGGCAACCGCGCCGCCGTTAGGCATGTAGCG 459824
Query 33864 CACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914
||||| ||||| || || | | |||| || || ||||| ||||||||
Sbjct 459825 GACTTCCGGGTCTTGTCCCAGATTACCGACGAGAATAACTTTGTTTACGCC 459875
>seq25848
Length=116905
Score = 107 bits (118), Expect = 6e-19
Identities = 184/267 (69%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719
|||||| | || ||| ||| ||||| | || |||| || ||| || | || || ||
Sbjct 108246 CCATTTGCGGGTCTGCAGCTGGCCTTCGATGTAGACTTTTGCGCCCTTGGTCAGGTATTC 108187
Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779
||| |||||||| || ||||| || || | || ||||||||||| || |||| ||
Sbjct 108186 ACCGGCAATTTCGGCCAGCTTTCCGAACACGACCACGCGGTGCCACTCGGTTTTTTCGCG 108127
Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839
| ||| || || || || ||| ||| ||| || || || | | | | | || ||
Sbjct 108126 CTGCTCGCCGGTGGCTTTGTCACGCCAGTTTTCGGACGTGGCCAGCGTCAGGCTCGCCAC 108067
Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899
|||||||| || |||||||| |||| || || |||| ||||| | || | ||||||
Sbjct 108066 CGCGCCGCCGTTCGGCATGTAGCGCAGCTCCGGTGCCTGACCTAAATTACCCACGATGAT 108007
Query 33900 TACTTTATTTACGCCGCGAGTTGCCAT 33926
||||| || | || || ||||||
Sbjct 108006 GACTTTGTTAATTCCACGTTCTGCCAT 107980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144854298689632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |