Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq19589 104 1e-17 >seq19589 Length=24186 Score = 104 bits (114), Expect = 1e-17 Identities = 121/161 (75%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 29598 TAAAACCCCTTCTTGTCCGGTTGCGGCGCAACCTGACCCCGAAGTGATGATCACCGATCA 29657 ||||||| ||||||| | ||| | ||| | ||| ||||||| || || ||||| Sbjct 11469 TAAAACC---TCTTGTCAGCCTGCTGTGCAGACCGACGCCGAAGTCGAAATTACTGATCA 11525 Query 29658 GGCGATTGAGGTTTTAACCCACCTGAACCAGGTAAGTGGCTCCCGGTATCAGAAGTCA-- 29715 ||| | ||||| | | | ||||||||||||| | |||||||| |||||| |||| Sbjct 11526 GGCTAAACAGGTTCTGAACTACCTGAACCAGGTCACCGGCTCCCGCTATCAG--GTCAGC 11583 Query 29716 AAAACCTCCCTGGAAAACATCCGTGCCCGACTGCGTGAGGG 29756 ||| |||| ||||| |||||||| ||| |||||||||| || Sbjct 11584 AAATCCTCACTGGATAACATCCGCGCCAGACTGCGTGAAGG 11624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247267589497264