Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10415 196 9e-48 seq3628 196 9e-48 seq284657 127 4e-27 seq6792 113 8e-23 seq4060 111 3e-22 seq691 96.9 6e-18 seq3759 75.2 2e-11 >seq10415 Length=18752 Score = 196 bits (216), Expect = 9e-48 Identities = 196/249 (79%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CTTTGCTCGAATACA 123 ||| | || ||||||||||||||||||||||| ||||||||||| | || ||||| Sbjct 6 GCCGGCACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGCAACGCCTGAATAAT 65 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCC 182 |||||||||||| ||||||||| | |||||||||||||||||||| | || || Sbjct 66 GGTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACACGAG 124 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||| ||||| || |||||| | ||||| | ||||||||||||||| Sbjct 125 GTAATGATTAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTT 184 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||| ||||| ||||||||||||||| || ||||| |||||||||||||||| Sbjct 185 GGACCGTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-A 243 Query 303 GAACGAAAG 311 ||||||||| Sbjct 244 GAACGAAAG 252 >seq3628 Length=117492 Score = 196 bits (216), Expect = 9e-48 Identities = 215/281 (77%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||||||| | || |||| || ||| | ||||||| | |||||||||||||||| || Sbjct 116502 TGCCCTTGATTGAGTGTCTTGGTTGGCCGGCACTTTTAATATGAAAAAATTAGAGTGCTC 116561 Query 100 AAAGCAGGC-CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 ||||||||| | ||| ||||| |||||||||||| ||||||||| | ||||||| Sbjct 116562 AAAGCAGGCGCAATGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCT-CGGTTCT 116620 Query 159 ATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 ||||||| ||||| | || || ||||||||||| ||||| || |||||| | ||| Sbjct 116621 ATTTTGTGGGTTTTCGGAACACGAGGTAATGATTAAGAGGGACAGACGGGGGCATTCGTA 116680 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 | || |||||||| ||||||||| | ||||| |||||||| |||||| || Sbjct 116681 CTGCGATGCTAGAGGTGATATTCTTGGACTGTCGCAAGACGAACTACTGTGAAAGCATTT 116740 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||| ||||||| |||||||| ||||||||||||| || Sbjct 116741 GCCAAGAATGTTTTTATTAATCA-AGAACGAAAGTTAGAGG 116780 >seq284657 Length=261 Score = 127 bits (140), Expect = 4e-27 Identities = 127/161 (79%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||||||| | || |||| ||| ||| | || ||||||||||||||||||||||| || Sbjct 160 TGCCCTTGATTGAGTGTCTTGGGTGGCCGGCACGTTTACTTTGAAAAAATTAGAGTGCTC 101 Query 100 AAAGCAGGC-CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 ||||||||| | || ||||| |||||||||||| ||||||||| | ||||||| Sbjct 100 AAAGCAGGCGCAACGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCT-CGGTTCT 42 Query 159 ATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGG 198 ||||||||||||| | || || ||||||||||| |||| Sbjct 41 ATTTTGTTGGTTTTCGGAACACGAGGTAATGATTAAGAGGG 1 >seq6792 Length=43928 Score = 113 bits (124), Expect = 8e-23 Identities = 161/219 (74%), Gaps = 7/219 (3%) Strand=Plus/Minus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CTTTGCTCGAATACATTA-GCATGGA 133 |||| |||||||||||| || | ||||||||| | | ||||| || | ||||||| Sbjct 19072 TACTATGAAAAAATTAG--TGCTTAAAGCAGGCACAAAGGCTGAATA-ATGATGCATGGA 19016 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTA 192 ||||| ||| ||||| | || ||||||||||||||||| || || | |||||||||| Sbjct 19015 ATAATGGAAAAGGACCT-CGCTTCTATTTTGTTGGTTTAAAGAACATGAGGTAATGATTA 18957 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | | ||| || | | || | |||| || | |||||||||||||||| | || Sbjct 18956 AGAAGGACAGACAGAGGCATTCTTATTGTGATGGTAAAGGTGAAATTCTTGGACTGTCTG 18897 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTT 291 ||||| |||||||| |||| || ||||| || |||| Sbjct 18896 AAGACGAACTACTGGAAAAGTATTTGCCAAGAATATTTT 18858 >seq4060 Length=105278 Score = 111 bits (122), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC--GCCGTAA 186 ||| |||||| ||||||||| | |||||||||||| ||||||| | ||| | | | | Sbjct 62175 ATGAAATAATGGAATAGGACCT-CGGTTCTATTTTTTTGGTTT-TCGGAACAAGAGGCAG 62118 Query 187 TGATTAATAGGGATAGTCG-GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 ||||||| ||||| || || |||| | ||||| || |||||| ||||| ||||| Sbjct 62117 TGATTAAGAGGGACAGACGAGGGGCATTCGTATTGCGACGTTAGAGGTTAAATTGTTGGA 62058 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| | |||||| ||||| || ||||| ||||||| |||||||| | || Sbjct 62057 CCGTCGCAAGACGTATTACTGCAAAAGCATTTGCCAAGAATGTTTTTATTAATCAAT-AA 61999 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 61998 CGAAAGTTAGAGG 61986 >seq691 Length=506383 Score = 96.9 bits (106), Expect = 6e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CTTTGCTCGAATACATTAGCA 129 || ||||||||||||||||||||||| ||||||||||| | | ||||| ||| Sbjct 377972 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGCAACACCTGAATAATGGTGCA 378031 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 ||||||||| |||||||| | |||||||||||||||||||| Sbjct 378032 TGGAATAATGGAATAGGATCT-CGGTTCTATTTTGTTGGTTT 378072 >seq3759 Length=115080 Score = 75.2 bits (82), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 14/194 (7%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||| |||||| |||||| || | |||| |||| ||||||| | ||| | | |||| Sbjct 62012 GCATGAAATAATGGAATAGAACCTATT-TTCTGTTTTATTGGTTTTT-GGAACACTGTAA 62069 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC------AGAGGTGAAATTC 240 ||||||| || | |||| | || |||||| | | ||||||||||||| Sbjct 62070 TGATTAAAGAGG---GGCGGGTGGGTA--TATTCACGTTGCGACAGTAGAGGTGAAATTC 62124 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||| | | |||| | ||| || ||||| | ||||| |||||||| ||||||| Sbjct 62125 TTGGACTGTCTTAAGATAAGCTATTGAAAAAGCATATGCCAAGAATGTTTTCTTTAATCA 62184 Query 301 GTGAACGAAAGTTA 314 ||| ||||| || Sbjct 62185 -AGAAAGAAAGCTA 62197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912575270464