Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq9010 136 2e-29 seq1000 127 8e-27 seq268029 114 5e-23 seq6085 104 1e-19 seq4799 95.1 5e-17 seq70673 93.3 2e-16 seq511 93.3 2e-16 seq294 82.4 3e-13 seq1651 80.6 1e-12 seq20825 78.8 4e-12 seq37 78.8 4e-12 seq553 77.0 1e-11 seq10867 75.2 5e-11 >seq9010 Length=30728 Score = 136 bits (150), Expect = 2e-29 Identities = 218/313 (70%), Gaps = 44/313 (14%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT--CAAA 465 ||||| ||| |||||||||||||||||||||||| | ||| ||| |||||| | || | Sbjct 19343 CCCGTTTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTCATTGGGTCTTGCACA 19284 Query 466 CCCGTGC--GCGTAATGAAAGTGAACGGAGG------------------TGGGAACCC-- 503 | | | ||| ||||||||| || | || ||||| ||| Sbjct 19283 GGCCTACAGGCGCAATGAAAGTTAAGGTTGGCCAGGCTGCCGACTGCATTGGGATCCCCG 19224 Query 504 ---------GTGAGGGTGCACCATCGACCGATCC----TG--ATGTCTTCGGATGGATTT 548 ||| ||| ||||| || || |||| || ||||| ||| ||| Sbjct 19223 CCTTCCGAGGTG-GGGCACACCAACGGCCCATCCCTACTGCTATGTCAGCGG---GATG- 19169 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| |||| || |||||||||||||||||||||||||||||||| || |||| Sbjct 19168 GAGTGAGAGTGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGGCAGAACGAAG 19109 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||| ||||||| |||||| ||||| |||| ||||||||| ||| | Sbjct 19108 CCAGAGGAAACTCTAGTGGAGGTCTGCAGCGATTCTGACGTGAAAATCGATCATCAGACC 19049 Query 669 TGGGTATAGGGGC 681 | ||||||||||| Sbjct 19048 TTGGTATAGGGGC 19036 Score = 82.4 bits (90), Expect = 3e-13 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 75 AGGTAAATTTCTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTG 133 ||||||| | | |||| |||||||| | ||| ||||||||||| ||||||| ||| Sbjct 19808 AGGTAAACTCCACCTAAGGCTAAATAC-GTCCACGAGACCGATAGTAAACAAGTACCGTG 19750 Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 | ||||| ||||||| |||||| | |||||||| || | |||||||| Sbjct 19749 AGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAATACGTGAAA 19701 >seq1000 Length=363136 Score = 127 bits (140), Expect = 8e-27 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 || ||||| || ||||| ||||||| |||| |||||||||| || ||| |||||| Sbjct 260138 GTGAGAGCGTACACGTTGGAACCCGAATGATGATGAACTATGCTTGGGCAGGACGAAGCC 260079 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 |||||||||||||||||||| | ||||||||||| | || ||||||||||||| | | Sbjct 260078 AGAGGAAACTCTGGTGGAGGTCCACAGCGGTTCTGACATGTAAATCGATCGTCAGAACTT 260019 Query 671 GGTATAGGGGCGA 683 |||| |||||||| Sbjct 260018 GGTACAGGGGCGA 260006 >seq268029 Length=385 Score = 114 bits (126), Expect = 5e-23 Identities = 114/144 (79%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | |||| ||||||| Sbjct 199 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCACCTAAGGCTAAAT 258 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 259 AC-GTCCACGAGACCGATAG-TAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 316 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 317 GAGAGAGTTCAAGAGTACGTGAAA 340 >seq6085 Length=55905 Score = 104 bits (114), Expect = 1e-19 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| |||||||| |||||||| ||||||||||||||||| ||| ||| |||| Sbjct 12181 GAGTGAGAGCATACACACTGGGACCCTAAAGATGGTGAACTATGACTGGGCAGGACGAAG 12240 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| |||||| ||||| || |||| || |||| | Sbjct 12241 CCAGAGGAAACTCTGGTGGAGGTCTGCAGCGATTCTGATGTAAAAATAAATTGTCAGACC 12300 Query 669 TGGGTATAGGGGCGA 683 | | |||||| ||| Sbjct 12301 TTGAAATAGGGTCGA 12315 >seq4799 Length=79500 Score = 95.1 bits (104), Expect = 5e-17 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||| Sbjct 74122 GTTGGGACCTGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAGGAAA--CTGG 74065 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 || || ||||| ||||| |||||||| Sbjct 74064 TGTAGATCTGCAGCAATTCTGATGTGCAAAT 74034 >seq70673 Length=227 Score = 93.3 bits (102), Expect = 2e-16 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| ||||| || |||||||||||||||||||||||||||||||| ||| |||| Sbjct 152 GAGTGAGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGACGAAG 211 Query 609 CCAGAGGAAACTCTGG 624 |||||||||||||||| Sbjct 212 CCAGAGGAAACTCTGG 227 >seq511 Length=539739 Score = 93.3 bits (102), Expect = 2e-16 Identities = 115/156 (74%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||| |||| | |||| || |||||||||||||| ||| |||||| | | |||| Sbjct 40716 CCTTCCTGGAGTTGGGTTGGTTCAGAATGCAGCTCTAAGTGGATGGTAAACTCCACCTAA 40775 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||||||| || | ||||| |||||| | ||||| ||||| ||||| |||||| | Sbjct 40776 GGCTAAATAATGCCATGAGACTGATAGCAAATAAGTACAGTGAAGGAAAGTTGAAAACAA 40835 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT 187 | ||| |||||| ||||| | ||||| |||| Sbjct 40836 CCTTG--AAGAGA---AAAAAATTCATGAAACTGTT 40866 >seq294 Length=729163 Score = 82.4 bits (90), Expect = 3e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| Sbjct 596789 TTGGGACCCGAAAGATGGTGAACTATGTCTGGGCAGGATGAAGCCAGAGGAAACTCTG 596732 >seq1651 Length=256739 Score = 80.6 bits (88), Expect = 1e-12 Identities = 88/118 (75%), Gaps = 8/118 (7%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||| || | ||||||| || ||| ||||| ||||||||||||| | Sbjct 19171 TTGGGACCTGAGAAATGGTGA--------TGGGCAGGACGAAGCTAGAGGAAACTCTGTT 19120 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||| | ||||| |||| || |||||||||| | | |||||| |||||| Sbjct 19119 GGAGGTCCGCAGTGATTCTGACGTGTAAGTCGATCGTCAGACGTTGGTATACGGGCGA 19062 >seq20825 Length=1807 Score = 78.8 bits (86), Expect = 4e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 |||| |||||| ||||||| ||||| |||||||||||||||||| | | |||||||||| Sbjct 1195 CTGGGGGAGGCCCGCAGCGATTCTGACGTGCAAATCGATCGTCAGACCTTGGTATAGGGG 1254 Query 681 CGA 683 ||| Sbjct 1255 CGA 1257 >seq37 Length=1623743 Score = 78.8 bits (86), Expect = 4e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| |||||| | |||| | | ||||| || ||||||||||||||||| || | Sbjct 607669 AGATAGTGAACCACAGCTGATAAAGACGAAGCTAGTGGAAACTCTGGTGGAGGTCCGAGG 607728 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||| ||||||||| |||||||| | | ||| ||||||||| Sbjct 607729 CGATTCTCACGTGCAAATTGATCGTCAGAACTTGGTTTAGGGGCGA 607774 >seq553 Length=539181 Score = 77.0 bits (84), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 ||| |||||||| |||||| ||| ||| | ||||| ||| || | ||| | |||| Sbjct 146676 AGTGAGAGCATATACGTTGGGCCCCAAAATAAAATGAAC-ATGTTTGGACAGGATAAAGC 146734 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 |||| |||||||||||||||| | ||| ||||| | ||||||| || ||| | | Sbjct 146735 CAGAAGAAACTCTGGTGGAGGTCCACAGAAATTCTGACATGCAAATAAATGATCAGACCT 146794 Query 670 GGGTATAGGGGC 681 |||||| |||| Sbjct 146795 TGGTATAAGGGC 146806 >seq10867 Length=18322 Score = 75.2 bits (82), Expect = 5e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 |||||||||||| |||| |||||| ||| || |||| ||||| |||||||||||||||| Sbjct 6816 GTGAAGCCAGAGAAAACCCTGGTGAAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGT 6757 Query 663 CAAA 666 | || Sbjct 6756 CGAA 6753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073848290150