Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1613 138 2e-30 seq1118 87.8 3e-15 seq76722 75.2 2e-11 seq2088 73.4 6e-11 >seq1613 Length=267325 Score = 138 bits (152), Expect = 2e-30 Identities = 99/114 (87%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 145 TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACT 204 |||| ||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| Sbjct 262912 TTTAATAGGCTAGAGTCTCGTCCGTTATCCGAATTAACCAAACAAATCGCTCCACCAACT 262971 Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||||||||||||||||||||| |||||||||||||||| | || ||||| Sbjct 262972 ACGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCTTAAACTGTC 263025 >seq1118 Length=336936 Score = 87.8 bits (96), Expect = 3e-15 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||| ||||| |||||||| |||||||||| ||||||||||||| || ||||| Sbjct 28689 TCTCGTTTGTTATTGGAATTAATCAGACAAATCG-TCCACCAACTAAGGGTGGGTATGCA 28747 Query 220 CCACCACCCATAGAATCAAGAAAGAGCT 247 | ||||||| ||||||||||||| || Sbjct 28748 TCTCCACCCACTGAATCAAGAAAGAACT 28775 >seq76722 Length=33055 Score = 75.2 bits (82), Expect = 2e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||| | ||||||||||||||| | |||||||||||||||| ||||||||| || ||| Sbjct 21821 GTTGTTGGAATTAACCAGACACGTTGCTCCACCAACTAAGAATGGCCATGCATCATCACA 21880 Query 228 CATAGAATCAAGAAAG 243 | |||| ||||||| Sbjct 21881 TAATGAATTAAGAAAG 21896 >seq2088 Length=215414 Score = 73.4 bits (80), Expect = 6e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||| |||||||| | ||||||||||||||| || |||| ||||||||||| | ||| Sbjct 50359 CTCCAAAAACTAAGATCAGCCATGCACCACCACACACTGAATGAAGAAAGAGCTCTTAAT 50300 Query 254 CTGTC 258 ||||| Sbjct 50299 CTGTC 50295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794586244833