Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2848 302 8e-80 seq6085 295 1e-77 seq7650 277 3e-72 seq2018 273 4e-71 seq1338 219 7e-55 seq1095 197 2e-48 seq287 140 6e-31 seq9010 138 2e-30 seq1817 138 2e-30 seq317 129 1e-27 seq1073 118 2e-24 seq2132 113 8e-23 seq7746 84.2 4e-14 seq7605 73.4 7e-11 >seq2848 Length=163508 Score = 302 bits (334), Expect = 8e-80 Identities = 194/212 (92%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137418 CCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 137477 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 137478 GCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGA 137537 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 137538 CGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACAC 137597 Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGAT 263 |||| || | ||| | | | | | ||||||| Sbjct 137598 CTCTTGCTTAAAACTCCTAAAGTCAAAAGGAT 137629 Score = 82.4 bits (90), Expect = 1e-13 Identities = 81/102 (79%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 50 AACCTGTCTCATGACGGTCTAAACCC--AGCTCACGTTCCCTATTAGTGGGTGAACAATC 107 ||||||||||| |||||| || |||| |||||||||| || ||| | || || | Sbjct 137321 AACCTGTCTCACGACGGTTTAGACCCCCAGCTCACGTT---TAATAGGGATTGTTCACCC 137377 Query 108 C-AACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | ||||||| |||||||||||||| ||||||||||||||| Sbjct 137378 CCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCC 137419 >seq6085 Length=55905 Score = 295 bits (326), Expect = 1e-77 Identities = 218/252 (87%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||| Sbjct 18532 GTCATCAGTAGGGTAAAATGAACCTGTCTCACGACGGTTCAAACCCAACTCACGTTCCCT 18591 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||||||||||||||||||| |||| ||||||||||||| || ||||| ||||||| Sbjct 18592 ATTAGTGGGTGAACAATCCAA-GCTTGGCGAATTCTGCTTCACAATAATAGGTAGAGCCG 18650 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||| Sbjct 18651 ACATTGAAGGATCAAAAAGTGATGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 18710 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||||||||||||||||| |||||| || | ||| ||| | | | ||| |||||||| Sbjct 18711 TCTGTGGTAACTTTTCTGATACCTCTTGCTTTAAACTTCTAAAGTCAAAAAGATCGATAA 18770 Query 270 GCCACACTTTCA 281 ||| |||||||| Sbjct 18771 GCC-CACTTTCA 18781 Score = 271 bits (300), Expect = 1e-70 Identities = 220/265 (83%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||| || ||||||| || |||||| ||| |||||||||||||| Sbjct 53658 GTCATCAGTAGGGTAAAACAAATTTGTCTCACGATGGTCTATACCTAGCTCACGTTCCCT 53599 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||||||||||||||||||| ||| |||||||||| | | || | |||||||| Sbjct 53598 ATTAGTGGGTGAACAATCCAATCCTTGGCGAATTCTGCCTTGCAGTGTTTGGAAGAGCTA 53539 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||||||| |||||| |||||||||||||| |||||| || |||||||||||||| Sbjct 53538 ACATCGAAGGATC-AAAAGCGACGTCGCTATGAACACTTGGCCGCTACAAGCCAGTTATC 53480 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||||||||| |||||||| ||||||| || | ||| | | | | | |||| ||| ||| Sbjct 53479 CCTGTGGTAGCTTTTCTGACACCTCTTGCTTAAAACTCCTAAAGTCAAAAGAATCAGTAG 53420 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||| ||||||| ||| ||||||| Sbjct 53419 GCCCCACTTTCGAGGTCCGTATTCA 53395 Score = 208 bits (230), Expect = 1e-51 Identities = 163/192 (85%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| ||| ||| |||||||||||||||||||||||||||||| Sbjct 22373 TACTGAGCAGGATTACTGTTGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 22314 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | || ||||||||||||||||||||||||||||||||||||||||||| ||| ||| || Sbjct 22313 ACGATGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCGAACACTTGGCG 22254 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||| | ||| ||||||||||||||||||||||||| |||||| | || ||| Sbjct 22253 AATTCTGCTCTGCAATGTTAGGAAGAGCCGACATCGAAGGATC-AAAAGCGATGTTGCTT 22195 Query 180 TGAACGCTTGGC 191 ||||| || ||| Sbjct 22194 TGAACACTCGGC 22183 >seq7650 Length=39375 Score = 277 bits (306), Expect = 3e-72 Identities = 221/265 (83%), Gaps = 1/265 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||||||||||||| ||| ||| || |||||||||| |||||||||||||| Sbjct 15306 GTCATCAGTAGGGTAAAACTAATTTGTGTCACGATGGTCTAAACCTAGCTCACGTTCCCT 15365 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||||||||||||||||||| ||| |||||||||||| | ||| | ||||||||| Sbjct 15366 ATTAGTGGGTGAACAATCCAATCCTTGGCGAATTCTGCTTTGTAATGTTTGGAAGAGCCA 15425 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||| |||||| | |||||| |||||||||||||| |||||| || |||||||||||||| Sbjct 15426 ACATTGAAGGAAC-AAAAGCGACGTCGCTATGAACACTTGGCCGCTACAAGCCAGTTATC 15484 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||||| ||| |||||||| ||||||| || | ||| | | | | | |||| ||| ||| Sbjct 15485 CCTGTCGTAGCTTTTCTGACACCTCTTGCTTAAAACTACTAAAGTCAAAAGAATCAGTAG 15544 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||| ||||||| ||| ||||||| Sbjct 15545 GCCCCACTTTCGAGGTCCGTATTCA 15569 >seq2018 Length=215788 Score = 273 bits (302), Expect = 4e-71 Identities = 195/223 (87%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 163867 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATTCAACGCTTGGCGAATTCTGCTTCA 163808 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 163807 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTTGCTATGAACGCTTGGC 163748 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||| |||||||||||||||||||||||||||||| |||||| || | ||| | | | Sbjct 163747 CGCCA-AAGCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGCTTAAAACTCCTAA 163689 Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | |||||||||||||||| | ||||| ||| ||||||| Sbjct 163688 AGTCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTCA 163646 >seq1338 Length=294564 Score = 219 bits (242), Expect = 7e-55 Identities = 164/191 (86%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct 189388 TATTAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGTAGAGCC 189329 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||| Sbjct 189328 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTAGCCGCCACAAGCCAATTAT 189269 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 ||||||| ||||||||||| ||||||| | | ||| | | | | ||||||||||| Sbjct 189268 CCCTGTGTTAACTTTTCTGACACCTCTTACTTAAAACCCCTAAAGTC-AAAGGATCGATG 189210 Query 269 GGCCACACTTT 279 | || | |||| Sbjct 189209 GACCCCGCTTT 189199 >seq1095 Length=333316 Score = 197 bits (218), Expect = 2e-48 Identities = 145/169 (86%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 ||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 87385 TGCCTAGGAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAAC 87326 Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||| ||||||||||||||||||||||||||||||||||| ||||||| || | ||| Sbjct 87325 GCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAA 87266 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | | | | |||||||||||||| | ||||| ||| |||||| Sbjct 87265 CTCCTAAAGTCAAAAGGATCGATAGGTCCAGCTTTCGCGGTCCGTATTC 87217 >seq287 Length=738573 Score = 140 bits (154), Expect = 6e-31 Identities = 120/147 (82%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 ||||||| ||||||||||| || |||| | |||| |||| | ||||||| ||||||| Sbjct 325415 TATTAGTAGGTGAACAATCTAATGCTTGGCAAATTATGCTCCACAATGATAG-AAGAGCC 325357 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||| |||||||||||| ||| || |||||||| |||||| ||| |||||||| Sbjct 325356 GACATCAAAGGATCAAAAAACAATGTTGCTATGAAGGCTTGGTCATCACTGGCCAGTTAC 325297 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCT 235 || |||||||||||||||| ||| ||| Sbjct 325296 CCTTGTGGTAACTTTTCTGACACATCT 325270 >seq9010 Length=30728 Score = 138 bits (152), Expect = 2e-30 Identities = 82/86 (95%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 17967 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTATACCCAGCTCACGTTCCCT 18026 Query 90 ATTAGTGGGTGAACAATCCAACGCTT 115 | |||||||||||||||||||| ||| Sbjct 18027 ACTAGTGGGTGAACAATCCAACACTT 18052 >seq1817 Length=239210 Score = 138 bits (152), Expect = 2e-30 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 85 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAG 144 ||||| |||| ||||||||||| ||| | || |||||||||||| ||| |||||| Sbjct 146468 TCCCTGTTAGAGGGTGAACAATACAATGTTTGGTGAATTCTGCTTCACAGTGACAGGAAG 146409 Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 | ||||| || |||||||||| | || ||||| ||| ||||| | ||||||||||| Sbjct 146408 GACAGACATTAAAAGATCAAAAAGAGATGTTGCTATAAACACTTGGTTACCACAAGCCAG 146349 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||| ||||||||||||||||||| || || | | || ||| | | | | ||| |||| Sbjct 146348 TTAGCCCTGTGGTAACTTTTCTGACATCTTTGGTCTAAAACTCCTAAAGTTAAAAAGATC 146289 Query 265 GATAGGCCA 273 | |||||| Sbjct 146288 AACAGGCCA 146280 >seq317 Length=708231 Score = 129 bits (142), Expect = 1e-27 Identities = 105/126 (83%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||| ||||||| | || Sbjct 423281 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAACCTAACCTATTTC 423222 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||| |||||||||||| || |||||||||| ||||||||||||| | Sbjct 423221 ACGACGGTCTAAACCTAGCTCACGTTCCATACTAGTGGGTGACCAATCCAACGCTTGGCC 423162 Query 120 AATTCT 125 |||||| Sbjct 423161 AATTCT 423156 >seq1073 Length=349830 Score = 118 bits (130), Expect = 2e-24 Identities = 124/162 (77%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGAT-AGGAAGAG 146 |||||| ||| | |||||||||| | || ||||||||||| | || || | || || Sbjct 226677 CTATTAATGGTTAAACAATCCAATGTTTGGTGAATTCTGCTTTGCAATTATAAAAAAAAG 226618 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 | ||||| ||||||||| | ||| | ||| ||||||| |||||||| ||||||| |||| Sbjct 226617 CTGACATGGAAGGATCAGATAGCGATGTCACTATGAATGCTTGGCTACCACAAGTAAGTT 226558 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248 |||| ||| |||||||| | |||| || || | ||| ||| Sbjct 226557 ATCCTTGTAACAACTTTTCAGACACCACTTGCTTAAAACTTC 226516 >seq2132 Length=217442 Score = 113 bits (124), Expect = 8e-23 Identities = 84/97 (87%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||| || Sbjct 86446 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTTTC 86505 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 | |||| |||||||||||||||||||||||||||||| Sbjct 86506 ACGACGATCTAAACCCAGCTCACGTTCCCTATTAGTG 86542 >seq7746 Length=35367 Score = 84.2 bits (92), Expect = 4e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG 77 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 6773 GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAG 6725 >seq7605 Length=38624 Score = 73.4 bits (80), Expect = 7e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 15936 CTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGT 15889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 851949640608