Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq19878 221 3e-55 >seq19878 Length=1465 Score = 221 bits (244), Expect = 3e-55 Identities = 291/397 (73%), Gaps = 20/397 (5%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||| | |||||| ||||| ||| |||||||| | ||| | |||||||| |||||||| Sbjct 1076 TTTACGATCCGAAGACCTTCATCACTCACGCGGCGTTGCTCCGTCAGGCTTTCGCCCATT 1135 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 GCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 1195 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | ||||| |||| ||| ||| ||||| ||| Sbjct 1196 GGCCGATCACCCTCTCAGGTCGGCTACGTATCGTTGCCTTGGTAAGCCGTTACCTTACCA 1255 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC--CCCCTCTTT 242 |||||||||| | |||| |||| ||||| | || | ||| | || || Sbjct 1256 ACTAGCTAATACGGCGCGGGTCCATCTATAAGTGACA-GCAAAACCGTCTTTCACTATTG 1314 Query 243 GGTCTTGCG-------ACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295 | |||| | |||| |||||||||| | |||||| | |||||||| || Sbjct 1315 AACCATGCGGTTCAACATATTATCCGGTATTAGCTCCGGTTTCCCGAAGTTATCCCAGTC 1374 Query 296 CATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACT--CGTCAGCGAAGCAGCA 352 ||| | ||| |||| ||||||||||||||||| || |||| | | |||| Sbjct 1375 TTATAGGTAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACGTCGG----GGAGCA 1430 Query 353 AGCT-GCTTCCTGTTACCGTTCGACTTGCATGTGTTA 388 |||| | ||||| || ||||||||||||| ||| Sbjct 1431 AGCTCCCCGTCTGTT--CGCTCGACTTGCATGTATTA 1465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1218894242368