Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq19878 432 1e-118 >seq19878 Length=1465 Score = 432 bits (478), Expect = 1e-118 Identities = 402/510 (79%), Gaps = 34/510 (7%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 ||||||||||||||||||||| |||||||||||| || | || ||||||| | | Sbjct 1416 AGCGGCGGACGGGTGAGTAACACGTGGGTAACCTACCTATAAGACTGGGATAACTTCGGG 1357 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGC---T 139 ||| |||||||| |||||||| || | |||||||| || | |||| | Sbjct 1356 AAACCGGAGCTAATACCGGATAATATG-TTGAACCGCATGGTTCAATAGTGAAAGACGGT 1298 Query 140 CCGGCGGT-ACAG---GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTA 195 || || || ||| |||||||| | |||||||||||||||||||||||||||| Sbjct 1297 TTTGCTGTCACTTATAGATGGACCCGCGCCGTATTAGCTAGTTGGTAAGGTAACGGCTTA 1238 Query 196 CCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACAC 255 ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1237 CCAAGGCAACGATACGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACAC 1178 Query 256 GGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGAT 315 |||||| ||||||||||||||||||||| |||||| || | |||||||| ||||||||| Sbjct 1177 GGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC 1118 Query 316 GCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG 375 | |||||||||||||||| |||||||| |||||| ||||||| |||||| | | ||||| Sbjct 1117 GGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAG 1058 Query 376 A---------TAA----------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAA 410 | ||| ||||||||| | | || ||||| ||||||| Sbjct 1057 AACAAATGTGTAAGTAACTGTGCACGTCTTGACGGTACCTAATCAGAAAGCCACGGCTAA 998 Query 411 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGC 470 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| Sbjct 997 CTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGGGC 939 Query 471 GTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||| | ||||||| ||||| ||||||| Sbjct 938 GTAAAGCGCGCGTAGGCGGTTTTTTAAGTC 909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1493304988032