Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq19878 165 2e-38 >seq19878 Length=1465 Score = 165 bits (182), Expect = 2e-38 Identities = 210/285 (74%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAG-CTCCCACA-- 57 ||||||||||||| ||||||||| |||| | || |||||| |||| | |||| Sbjct 982 GGCTGCTGGCACGTAGTTAGCCGTGGCTTTCTGATTAGGTACCGTCAAGACGTGCACAGT 1041 Query 58 --CGTGGAAGGTT-TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | | || || |||||| |||| ||| ||||| ||||| ||| |||||||| Sbjct 1042 TACTTACACATTTGTTCTTCCCTAATAACAGAGTTTTACGATCCGAAGA-CCTTCATCAC 1100 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 |||||| | | ||| |||| || ||| |||||| || ||||| ||||||||||| Sbjct 1101 TCACGCGGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTC 1160 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| |||||||||||||||||||| ||||| || | |||||||| | || Sbjct 1161 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCT 1220 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || ||| ||||||||| || |||| ||||| Sbjct 1221 ACGTATCGTTGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAAT 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1065734756416